- c -

• calcDispersionCorrection() : NonbondedForceImpl
• calcEwaldParameters() : NonbondedForceImpl
• calcForcesAndEnergy() : CMAPTorsionForceImpl , CustomBondForceImpl , GBSAOBCForceImpl , GBVIForceImpl , CustomCompoundBondForceImpl , HarmonicAngleForceImpl , HarmonicBondForceImpl , CMMotionRemoverImpl , CustomExternalForceImpl , MonteCarloBarostatImpl , NonbondedForceImpl , CustomGBForceImpl , PeriodicTorsionForceImpl , RBTorsionForceImpl , AndersenThermostatImpl , ContextImpl , CustomHbondForceImpl , CustomNonbondedForceImpl , CustomAngleForceImpl , CustomTorsionForceImpl , ForceImpl
• calcKineticEnergy() : ContextImpl
• calcMapDerivatives() : CMAPTorsionForceImpl
• calcParticleGroups() : AndersenThermostatImpl
• calcPMEParameters() : NonbondedForceImpl
• cleanup() : VariableLangevinIntegrator , VariableVerletIntegrator , VerletIntegrator , BrownianIntegrator , CustomIntegrator , Integrator , LangevinIntegrator
• CMAPTorsionForce() : CMAPTorsionForce
• CMAPTorsionForceImpl() : CMAPTorsionForceImpl
• CMMotionRemover() : CMMotionRemover
• CMMotionRemoverImpl() : CMMotionRemoverImpl
• CollisionFrequency() : AndersenThermostat
• computeKineticEnergy() : BrownianIntegrator , CustomIntegrator , Integrator , LangevinIntegrator , VariableLangevinIntegrator , VariableVerletIntegrator , VerletIntegrator
• computeVirtualSites() : Context , ContextImpl
• Context() : Context
• contextCreated() : Platform
• contextDestroyed() : Platform
• ContextImpl() : ContextImpl
• createCheckpoint() : Context , ContextImpl
• createExceptionsFromBonds() : NonbondedForce
• createImpl() : CustomCompoundBondForce , CustomExternalForce , CustomGBForce , CustomHbondForce , HarmonicBondForce , CustomTorsionForce , GBSAOBCForce , GBVIForce , HarmonicAngleForce , MonteCarloBarostat , PeriodicTorsionForce , RBTorsionForce , CustomBondForce , CMMotionRemover , CustomAngleForce , CMAPTorsionForce , NonbondedForce , CustomNonbondedForce , AndersenThermostat , Force
• createKernel() : Platform
• createKernelImpl() : KernelFactory
• createNaturalSpline() : SplineFitter
• createPeriodicSpline() : SplineFitter
• cross() : Vec3
• CustomAngleForce() : CustomAngleForce
• CustomAngleForceImpl() : CustomAngleForceImpl
• CustomBondForce() : CustomBondForce
• CustomBondForceImpl() : CustomBondForceImpl
• CustomCompoundBondForce() : CustomCompoundBondForce
• CustomCompoundBondForceImpl() : CustomCompoundBondForceImpl
• CustomExternalForce() : CustomExternalForce
• CustomExternalForceImpl() : CustomExternalForceImpl
• CustomGBForce() : CustomGBForce
• CustomGBForceImpl() : CustomGBForceImpl
• CustomHbondForce() : CustomHbondForce
• CustomHbondForceImpl() : CustomHbondForceImpl
• CustomIntegrator() : CustomIntegrator
• CustomNonbondedForce() : CustomNonbondedForce
• CustomNonbondedForceImpl() : CustomNonbondedForceImpl
• CustomTorsionForce() : CustomTorsionForce
• CustomTorsionForceImpl() : CustomTorsionForceImpl