This class serves as a serializable FiberCompressiveForceCosPennationCurve, which is used to ensure that the pennation angle approaches but never reaches an angle of 90 degrees. More...

Inheritance diagram for OpenSim::FiberCompressiveForceCosPennationCurve:

OpenSim Properties, Sockets, Outputs, Inputs
Properties (single-value)
double	engagement_angle_in_degrees
	"Engagement angle of the compressive pennation spring in degrees" More...

Properties (optional)
double	stiffness_at_perpendicular
	"Stiffness of the curve at pennation angle of 90 degrees" More...

double	curviness
	"Fiber curve bend, from linear to maximum bend (0-1)" More...

Public Member Functions
	FiberCompressiveForceCosPennationCurve ()
	Default constructor creates an curve with the default property values, and assigns it a default name. More...

	FiberCompressiveForceCosPennationCurve (double engagementAngleInDegrees, double stiffnessAtPerpendicular, double curviness, const std::string &muscleName)
	Constructs a C2 continuous compressive fiber force cos pennation curve. More...

	FiberCompressiveForceCosPennationCurve (double engagementAngleInDegrees, const std::string &muscleName)
	Constructs a C2 continuous compressive fiber force cos pennation curve using only the mandatory property, engagmentAngleInDegrees. More...

double	getEngagementAngleInDegrees () const
	More...

double	getStiffnessAtPerpendicularInUse () const
	More...

double	getCurvinessInUse () const
	More...

bool	isFittedCurveBeingUsed () const
	More...

void	setEngagementAngleInDegrees (double aEngagementAngleInDegrees)
	More...

void	setOptionalProperties (double aStiffnessAtPerpendicular, double aCurviness)
	More...

double	calcValue (double cosPennationAngle) const
	Calculates the value of the curve evaluated at cosPennationAngle. More...

double	calcValue (const SimTK::Vector &x) const override
	Implement the generic OpenSim::Function interface. More...

double	calcDerivative (double cosPennationAngle, int order) const
	Calculates the derivative of the fiber compressive force pennation angle curve w.r.t. More...

double	calcDerivative (const std::vector< int > &derivComponents, const SimTK::Vector &x) const override
	If possible, use the simpler overload above. More...

double	calcIntegral (double cosPennationAngle) const
	More...

SimTK::Vec2	getCurveDomain () const
	This function returns a SimTK::Vec2 that contains in its 0th element the lowest value of the curve domain, and in its 1st element the highest value in the curve domain of the curve. More...

void	printMuscleCurveToCSVFile (const std::string &path)
	This function will generate a csv file with a name that matches the curve name (e.g. More...

void	ensureCurveUpToDate ()

Property-related functions
const double &	get_engagement_angle_in_degrees () const
	Get the value of the engagement_angle_in_degrees property. More...

double &	upd_engagement_angle_in_degrees ()
	Get a writable reference to the engagement_angle_in_degrees property. More...

void	set_engagement_angle_in_degrees (const double &value)
	Set the value of the engagement_angle_in_degrees property. More...

const double &	get_stiffness_at_perpendicular () const
	Get the value of the stiffness_at_perpendicular property. More...

double &	upd_stiffness_at_perpendicular ()
	Get a writable reference to the stiffness_at_perpendicular property. More...

void	set_stiffness_at_perpendicular (const double &value)
	Set the value of the stiffness_at_perpendicular property. More...

const double &	get_curviness () const
	Get the value of the curviness property. More...

double &	upd_curviness ()
	Get a writable reference to the curviness property. More...

void	set_curviness (const double &value)
	Set the value of the curviness property. More...

Public Member Functions inherited from OpenSim::Function
	Function ()

	Function (const Function &aFunction)

virtual	~Function ()

virtual void	init (Function *aFunction)

Function &	operator= (const Function &aFunction)

virtual int	getArgumentSize () const
	Get the number of components expected in the input vector. More...

virtual int	getMaxDerivativeOrder () const
	Get the maximum derivative order this Function object can calculate. More...

void	assign (Object &aObject) override
	This allows copy assignment in the Java GUI. More...

Public Member Functions inherited from OpenSim::Object
virtual	~Object ()
	Virtual destructor for cleanup. More...

bool	isEqualTo (const Object &aObject) const
	Equality operator wrapper for use from languages not supporting operator overloading. More...

Object &	operator= (const Object &aObject)
	Copy assignment copies he base class fields, including the properties. More...

virtual bool	operator== (const Object &aObject) const
	Determine if two objects are equal. More...

virtual bool	operator< (const Object &aObject) const
	Provide an ordering for objects so they can be put in sorted containers. More...

void	setName (const std::string &name)
	Set the name of the Object. More...

const std::string &	getName () const
	Get the name of this Object. More...

void	setDescription (const std::string &description)
	Set description, a one-liner summary. More...

const std::string &	getDescription () const
	Get description, a one-liner summary. More...

const std::string &	getAuthors () const
	Get Authors of this Object. More...

void	setAuthors (const std::string &authors)
	Set Authors of this object. More...

const std::string &	getReferences () const
	Get references or publications to cite if using this object. More...

void	setReferences (const std::string &references)
	Set references or publications to cite if using this object. More...

int	getNumProperties () const
	Determine how many properties are stored with this Object. More...

const AbstractProperty &	getPropertyByIndex (int propertyIndex) const
	Get a const reference to a property by its index number, returned as an AbstractProperty. More...

AbstractProperty &	updPropertyByIndex (int propertyIndex)
	Get a writable reference to a property by its index number, returned as an AbstractProperty. More...

bool	hasProperty (const std::string &name) const
	Return true if this Object has a property of any type with the given name, which must not be empty. More...

const AbstractProperty &	getPropertyByName (const std::string &name) const
	Get a const reference to a property by its name, returned as an AbstractProperty. More...

AbstractProperty &	updPropertyByName (const std::string &name)
	Get a writable reference to a property by its name, returned as an AbstractProperty. More...

template<class T >
bool	hasProperty () const
	Return true if this Object contains an unnamed, one-object property that contains objects of the given template type T. More...

template<class T >
const Property< T > &	getProperty (const PropertyIndex &index) const
	Get property of known type Property<T> as a const reference; the property must be present and have the right type. More...

template<class T >
Property< T > &	updProperty (const PropertyIndex &index)
	Get property of known type Property<T> as a writable reference; the property must be present and have the right type. More...

bool	isObjectUpToDateWithProperties () const
	Returns `true` if no property's value has changed since the last time setObjectIsUpToDateWithProperties() was called. More...

void	readObjectFromXMLNodeOrFile (SimTK::Xml::Element &objectElement, int versionNumber)
	We're given an XML element from which we are to populate this Object. More...

virtual void	updateFromXMLNode (SimTK::Xml::Element &objectElement, int versionNumber)
	Use this method to deserialize an object from a SimTK::Xml::Element. More...

void	updateXMLNode (SimTK::Xml::Element &parent, const AbstractProperty *prop=nullptr) const
	Serialize this object into the XML node that represents it. More...

bool	getInlined () const
	Inlined means an in-memory Object that is not associated with an XMLDocument. More...

void	setInlined (bool aInlined, const std::string &aFileName="")
	Mark this as inlined or not and optionally provide a file name to associate with the new XMLDocument for the non-inline case. More...

std::string	getDocumentFileName () const
	If there is a document associated with this object then return the file name maintained by the document. More...

int	getDocumentFileVersion () const
	If there is a document associated with this object then return its version number. More...

void	setAllPropertiesUseDefault (bool aUseDefault)

bool	print (const std::string &fileName) const
	Write this Object into an XML file of the given name; conventionally the suffix to use is ".osim". More...

std::string	dump (bool dumpName=false)
	dump the XML representation of this Object into an std::string and return it. More...

virtual bool	isA (const char *type) const
	The default implementation returns true only if the supplied string is "Object"; each Object-derived class overrides this to match its own class name. More...

const std::string &	toString () const
	Wrapper to be used on Java side to display objects in tree; this returns just the object's name. More...

PropertySet &	getPropertySet ()
	OBSOLETE: Get a reference to the PropertySet maintained by the Object. More...

const PropertySet &	getPropertySet () const

Public Types
typedef FiberCompressiveForceCosPennationCurve	Self
	This typedef might be useful within the member functions of this class. More...

typedef Function	Super
	Use this typedef to refer to the superclass of this class. More...

Public Types inherited from OpenSim::Function
typedef Function	Self
	This typedef might be useful within the member functions of this class. More...

typedef Object	Super
	Use this typedef to refer to the superclass of this class. More...

Auto-generated functions
static FiberCompressiveForceCosPennationCurve *	safeDownCast (OpenSim::Object *obj)
	For use in MATLAB and Python to access the concrete class. More...

static const std::string &	getClassName ()
	This returns "FiberCompressiveForceCosPennationCurve". More...

void	assign (Object &aObject) override
	This allows copy assignment in the Java GUI. More...

FiberCompressiveForceCosPennationCurve *	clone () const override
	Create a new heap-allocated copy of the concrete object to which this Object refers. More...

const std::string &	getConcreteClassName () const override
	Returns the class name of the concrete Object-derived class of the actual object referenced by this Object, as a string. More...

Additional Inherited Members
Static Public Member Functions inherited from OpenSim::Function
static Function *	makeFunctionOfType (Function *aFunction, const std::string &aNewTypeName)

static Function *	safeDownCast (OpenSim::Object *obj)
	For use in MATLAB and Python to access the concrete class. More...

static const std::string &	getClassName ()
	This returns "Function". More...

Static Public Member Functions inherited from OpenSim::Object
static void	registerType (const Object &defaultObject)
	Register an instance of a class; if the class is already registered it will be replaced. More...

static void	renameType (const std::string &oldTypeName, const std::string &newTypeName)
	Support versioning by associating the current Object type with an old name. More...

static const Object *	getDefaultInstanceOfType (const std::string &concreteClassName)
	Return a pointer to the default instance of the registered (concrete) Object whose class name is given, or NULL if the type is not registered. More...

template<class T >
static bool	isObjectTypeDerivedFrom (const std::string &concreteClassName)
	Return true if the given concrete object type represents a subclass of the template object type T, and thus could be referenced with a T*. More...

static Object *	newInstanceOfType (const std::string &concreteClassName)
	Create a new instance of the concrete Object type whose class name is given as concreteClassName. More...

static void	getRegisteredTypenames (Array< std::string > &typeNames)
	Retrieve all the typenames registered so far. More...

template<class T >
static void	getRegisteredObjectsOfGivenType (ArrayPtrs< T > &rArray)
	Return an array of pointers to the default instances of all registered (concrete) Object types that derive from a given Object-derived type that does not have to be concrete. More...

static bool	PrintPropertyInfo (std::ostream &os, const std::string &classNameDotPropertyName, bool printFlagInfo=true)
	Dump formatted property information to a given output stream, useful for creating a "help" facility for registered objects. More...

static bool	PrintPropertyInfo (std::ostream &os, const std::string &className, const std::string &propertyName, bool printFlagInfo=true)
	Same as the other signature but the class name and property name are provided as two separate strings. More...

static Object *	makeObjectFromFile (const std::string &fileName)
	Create an OpenSim object whose type is based on the tag at the root node of the XML file passed in. More...

static const std::string &	getClassName ()
	Return the name of this class as a string; i.e., "Object". More...

static void	setSerializeAllDefaults (bool shouldSerializeDefaults)
	Static function to control whether all registered objects and their properties are written to the defaults section of output files rather than only those values for which the default was explicitly overwritten when read in from an input file or set programmatically. More...

static bool	getSerializeAllDefaults ()
	Report the value of the "serialize all defaults" flag. More...

static bool	isKindOf (const char *type)
	Returns true if the passed-in string is "Object"; each Object-derived class defines a method of this name for its own class name. More...

static void	setDebugLevel (int newLevel)
	Set the debug level to get verbose output. More...

static int	getDebugLevel ()
	Get current setting of debug level. More...

static Object *	SafeCopy (const Object *aObject)
	Use the clone() method to duplicate the given object unless the pointer is null in which case null is returned. More...

static void	RegisterType (const Object &defaultObject)
	OBSOLETE alternate name for registerType(). More...

static void	RenameType (const std::string &oldName, const std::string &newName)
	OBSOLETE alternate name for renameType(). More...

Static Public Attributes inherited from OpenSim::Object
static const std::string	DEFAULT_NAME
	Name used for default objects when they are serialized. More...

Protected Member Functions inherited from OpenSim::Function
void	resetFunction ()
	This should be called whenever this object has been modified. More...

Protected Member Functions inherited from OpenSim::Object
	Object ()
	The default constructor is only for use by constructors of derived types. More...

	Object (const std::string &fileName, bool aUpdateFromXMLNode=true)
	Constructor from a file, to be called from other constructors that take a file as input. More...

	Object (const Object &source)
	Copy constructor is invoked automatically by derived classes with default copy constructors; otherwise it must be invoked explicitly. More...

	Object (SimTK::Xml::Element &aElement)
	Construct the base class portion of an Object from a given Xml element that describes this Object. More...

template<class T >
PropertyIndex	addProperty (const std::string &name, const std::string &comment, const T &value)
	Define a new single-value property of known type T, with the given name, associated comment, and initial value. More...

template<class T >
PropertyIndex	addOptionalProperty (const std::string &name, const std::string &comment)
	Add an optional property, meaning it can contain either no value or a single value. More...

template<class T >
PropertyIndex	addOptionalProperty (const std::string &name, const std::string &comment, const T &value)
	Add an optional property, meaning it can contain either no value or a single value. More...

template<class T >
PropertyIndex	addListProperty (const std::string &name, const std::string &comment, int minSize, int maxSize)
	Define a new list-valued property of known type T, with the given name, associated comment, minimum (==0) and maximum (>0) allowable list lengths, and a zero-length initial value. More...

template<class T , template< class > class Container>
PropertyIndex	addListProperty (const std::string &name, const std::string &comment, int minSize, int maxSize, const Container< T > &valueList)
	Define a new list-valued property as above, but assigning an initial value via some templatized container class that supports size() and indexing. More...

PropertyIndex	getPropertyIndex (const std::string &name) const
	Look up a property by name and return its PropertyIndex if it is found. More...

template<class T >
PropertyIndex	getPropertyIndex () const
	Look up an unnamed property by the type of object it contains, and return its PropertyIndex if it is found. More...

void	setObjectIsUpToDateWithProperties ()
	When an object is initialized using the current values of its properties, it can set a flag indicating that it is up to date. More...

void	clearObjectIsUpToDateWithProperties ()
	For testing or debugging purposes, manually clear the "object is up to date with respect to properties" flag. More...

void	makeObjectNamesConsistentWithProperties ()
	Make sure the name of an object is consistent with its property type. More...

void	updateFromXMLDocument ()
	Use this method only if you're deserializing from a file and the object is at the top level; that is, primarily in constructors that take a file name as input. More...

void	setDocument (XMLDocument *doc)
	Unconditionally set the XMLDocument associated with this object. More...

const XMLDocument *	getDocument () const
	Get a const pointer to the document (if any) associated with this object. More...

XMLDocument *	updDocument ()
	Get a writable pointer to the document (if any) associated with this object. More...

Protected Attributes inherited from OpenSim::Function
SimTK::Function *	_function

Protected Attributes inherited from OpenSim::Object
PropertySet	_propertySet
	OBSOLETE: Property_Deprecated set for serializable member variables of this and derived classes. More...

Related Functions inherited from OpenSim::Object
#define	OpenSim_DECLARE_CONCRETE_OBJECT(ConcreteClass, SuperClass)
	Macro to be included as the first line of the class declaration for any non-templatized, concrete class that derives from OpenSim::Object. More...

#define	OpenSim_DECLARE_ABSTRACT_OBJECT(ConcreteClass, SuperClass)
	Macro to be included as the first line of the class declaration for any still-abstract class that derives from OpenSim::Object. More...

#define	OpenSim_DECLARE_CONCRETE_OBJECT_T(ConcreteClass, TArg, SuperClass)
	Macro to be included as the first line of the class declaration for any templatized, concrete class that derives from OpenSim::Object, like Set<T>. More...

#define	OpenSim_DECLARE_ABSTRACT_OBJECT_T(ConcreteClass, TArg, SuperClass)
	Macro to be included as the first line of the class declaration for any templatized, still-abstract class that derives from OpenSim::Object. More...

Detailed Description

This class serves as a serializable FiberCompressiveForceCosPennationCurve, which is used to ensure that the pennation angle approaches but never reaches an angle of 90 degrees.

Preventing the fibers from achieving a pennation angle of 90 degrees is important for equilibrium muscle models which have a singularity at this value.

This curve is designed to work with the muscle model in such a way that it acts like a spring that the pennated muscle fibers contact it as the fiber rotates (circled in red). When the spring engages it will exert a force on the fiber that will prevent it from shortening further, thus preventing the pennation angle from reaching 90 degrees.

Note that this object should be updated through the set methods provided. These set methods will take care of rebuilding the curve correctly. If you modify the properties directly, the curve will not be rebuilt, and upon calling a function like calcValue, calcDerivative, or printCurveToCSVFile an exception will be thrown because the curve is out of date with its properties.

Author: Matt Millard

Member Typedef Documentation

◆ Self

typedef FiberCompressiveForceCosPennationCurve OpenSim::FiberCompressiveForceCosPennationCurve::Self

This typedef might be useful within the member functions of this class.

This is generated by the OpenSim_DECLARE_*_OBJECT macros.

◆ Super

typedef Function OpenSim::FiberCompressiveForceCosPennationCurve::Super

Use this typedef to refer to the superclass of this class.

Avoid using the explicit type name of the superclass; this would introduce bugs if the superclass is changed.

This is generated by the OpenSim_DECLARE_*_OBJECT macros.

Constructor & Destructor Documentation

◆ FiberCompressiveForceCosPennationCurve() [1/3]

OpenSim::FiberCompressiveForceCosPennationCurve::FiberCompressiveForceCosPennationCurve ( )

Default constructor creates an curve with the default property values, and assigns it a default name.

◆ FiberCompressiveForceCosPennationCurve() [2/3]

OpenSim::FiberCompressiveForceCosPennationCurve::FiberCompressiveForceCosPennationCurve	(	double	engagementAngleInDegrees,
		double	stiffnessAtPerpendicular,
		double	curviness,
		const std::string &	muscleName
	)

Constructs a C2 continuous compressive fiber force cos pennation curve.

The sole purpose of this curve is to prevent the pennation angle from reaching an angle of 90 degrees. Details to appear in Millard et al. 2012.

Parameters

engagementAngleInDegrees	The pennation angle engagement angle of the fiber compressive force pennation curve. Making the spring engage too far from 90 degrees may unrealistically limit the force production capability of the muscle. An engagement angle of 80 degrees is a good place to start.
stiffnessAtPerpendicular	This is the stiffness of the compressive elastic force length spring when the pennation angle reaches 90 degrees. Note that the units of this stiffness are (normalized force) / cos(engagmentAngleInDegrees). If the engagement angle is 80 degrees, a good stiffness to start with is -2*(1/cosd(engagementAngleInDegrees))
curviness	A dimensionless parameter between [0-1] that controls how the curve is drawn: 0 will create a curve that is very close to a straight line segment while a value of 1 will create a curve that smoothly fills the corner formed by the linear extrapolation of 'stiffnessAtPerpendicularFiber' and the x axis as shown in the figure. A good curviness parameter value to start with is 0.5.
muscleName	The name of the muscle this curve belongs to. This name is used to create the name of this curve, which is formed simply by appending "_FiberCompressiveForceCosPennationCurve" to the string in muscleName. This name is used for making intelligible error messages and also for naming the XML version of this curve when it is serialized.

Conditions:

        0 < engagmentAngleInDegrees < 90
        stiffnessAtPerpendicular < -1/engagmentAngleInDegrees
        0 <= curviness <= 1

Computational Costs

        ~174,100 flops

Default Parameter Values

         engagmentAngleInDegrees = 80

Example:

◆ FiberCompressiveForceCosPennationCurve() [3/3]

OpenSim::FiberCompressiveForceCosPennationCurve::FiberCompressiveForceCosPennationCurve	(	double	engagementAngleInDegrees,
		const std::string &	muscleName
	)

Constructs a C2 continuous compressive fiber force cos pennation curve using only the mandatory property, engagmentAngleInDegrees.

The sole purpose of this curve is to prevent the pennation angle from reaching an angle of 90 degrees. Details to appear in Millard et al. 2012.

Parameters

engagementAngleInDegrees	The pennation angle engagement angle of the fiber compressive force pennation curve. Making the spring engage too far from 90 degrees may unrealistically limit the force production capability of the muscle. An engagement angle of 80 degrees is a good place to start.
muscleName	The name of the muscle this curve belongs to. This name is used to create the name of this curve, which is formed simply by appending "_FiberCompressiveForceCosPennationCurve" to the string in muscleName. This name is used for making intelligible error messages and also for naming the XML version of this curve when it is serialized.

Optional Parameters If the optional parameters have not yet been set, they are computed when functions getStiffnessAtPerpendicularInUse(), and getCurvinessInUse() are called. See the documentation for these functions for details

Conditions:

        0 < engagmentAngleInDegrees < 90

Computational Costs

        ~174,100 flops

Default Parameter Values

         engagmentAngleInDegrees = 80

Example:

Member Function Documentation

◆ assign()

void OpenSim::FiberCompressiveForceCosPennationCurve::assign ( Object & aObject )

inlineoverride

This allows copy assignment in the Java GUI.

Exceptions

Exception if the argument is not of type FiberCompressiveForceCosPennationCurve.

◆ calcDerivative() [1/2]

double OpenSim::FiberCompressiveForceCosPennationCurve::calcDerivative	(	double	cosPennationAngle,
		int	order
	)		const

Calculates the derivative of the fiber compressive force pennation angle curve w.r.t.

to cosPennationAngle.

Parameters

cosPennationAngle	The cosine of the fiber pennation angle
order	the order of the derivative. Only values of 0,1 and 2 are acceptable.

Returns: the derivative of the fiber compressive force pennation angle curve w.r.t. to cosPennationAngle

Computational Costs

    x in curve domain  : ~391 flops
    x in linear section:   ~2 flops

◆ calcDerivative() [2/2]

double OpenSim::FiberCompressiveForceCosPennationCurve::calcDerivative	(	const std::vector< int > &	derivComponents,
		const SimTK::Vector &	x
	)		const

overridevirtual

If possible, use the simpler overload above.

Reimplemented from OpenSim::Function.

◆ calcIntegral()

double OpenSim::FiberCompressiveForceCosPennationCurve::calcIntegral ( double cosPennationAngle ) const

Parameters

cosPennationAngle The cosine of the pennation angle

Returns: Computes the normalized area under the curve. For this curve, this quantity corresponds to the normalized potential energy stored in the fiber compressive force cos pennation spring - simply multiply this quantity by the number of NormForce (where NormForce corresponds to the number of Newtons that 1 normalized force corresponds to) to obtain the potential energy stored in the fiber in units of Joules. Note that NormDistance is omitted because the length dimension of this curve is not normalized, only the force dimension.

Computational Costs

    x in curve domain  : ~13 flops
    x in linear section: ~19 flops

◆ calcValue() [1/2]

double OpenSim::FiberCompressiveForceCosPennationCurve::calcValue ( double cosPennationAngle ) const

Calculates the value of the curve evaluated at cosPennationAngle.

Parameters

cosPennationAngle The cosine of the fiber pennation angle

Returns: the normalized force generated by the compressive force element

Computational Costs

    x in curve domain  : ~282 flops
    x in linear section:   ~5 flops

◆ calcValue() [2/2]

double OpenSim::FiberCompressiveForceCosPennationCurve::calcValue ( const SimTK::Vector & x ) const

inlineoverridevirtual

Implement the generic OpenSim::Function interface.

Reimplemented from OpenSim::Function.

◆ clone()

FiberCompressiveForceCosPennationCurve* OpenSim::FiberCompressiveForceCosPennationCurve::clone ( ) const

inlineoverridevirtual

Create a new heap-allocated copy of the concrete object to which this Object refers.

It is up to the caller to delete the returned object when no longer needed. Every concrete object deriving from Object implements this pure virtual method automatically, via the declaration macro it invokes (e.g., OpenSim_DECLARE_CONCRETE_OBJECT()). Note that the concrete class overrides modify the return type to be a pointer to the concrete object; that still overrides the base class method because the return type is covariant with (that is, derives from) Object.

Implements OpenSim::Function.

◆ ensureCurveUpToDate()

void OpenSim::FiberCompressiveForceCosPennationCurve::ensureCurveUpToDate ( )

◆ get_curviness()

const double& OpenSim::FiberCompressiveForceCosPennationCurve::get_curviness ( ) const

inline

Get the value of the curviness property.

◆ get_engagement_angle_in_degrees()

const double& OpenSim::FiberCompressiveForceCosPennationCurve::get_engagement_angle_in_degrees ( ) const

inline

Get the value of the engagement_angle_in_degrees property.

◆ get_stiffness_at_perpendicular()

const double& OpenSim::FiberCompressiveForceCosPennationCurve::get_stiffness_at_perpendicular ( ) const

inline

Get the value of the stiffness_at_perpendicular property.

◆ getClassName()

static const std::string& OpenSim::FiberCompressiveForceCosPennationCurve::getClassName ( )

inlinestatic

This returns "FiberCompressiveForceCosPennationCurve".

See getConcreteClassName() if you want the class name of the underlying concrete object instead.

This is generated by the OpenSim_DECLARE_*_OBJECT macros.

◆ getConcreteClassName()

const std::string& OpenSim::FiberCompressiveForceCosPennationCurve::getConcreteClassName ( ) const

inlineoverridevirtual

Returns the class name of the concrete Object-derived class of the actual object referenced by this Object, as a string.

This is the string that is used as the tag for this concrete object in an XML file. Every concrete class derived from Object automatically overrides this method via the declaration macro it uses. See getClassName() to get the class name of the referencing (possibly abstract) class rather than the concrete object.

See also: getClassName()

Implements OpenSim::Function.

◆ getCurveDomain()

SimTK::Vec2 OpenSim::FiberCompressiveForceCosPennationCurve::getCurveDomain ( ) const

This function returns a SimTK::Vec2 that contains in its 0th element the lowest value of the curve domain, and in its 1st element the highest value in the curve domain of the curve.

Outside of this domain the curve is approximated using linear extrapolation.

Returns: The minimum and maximum value of the domain, x, of the curve y(x). Within this range y(x) is a curve, outside of this range the function y(x) is a C2 (continuous to the second derivative) linear extrapolation

◆ getCurvinessInUse()

double OpenSim::FiberCompressiveForceCosPennationCurve::getCurvinessInUse ( ) const

Returns: A dimensionless parameter between [0-1] that controls how the curve is drawn: 0 will create a curve that is very close to a straight line segment while a value of 1 will create a curve that smoothly fills the corner formed by the linear extrapolation of 'StiffnessAtPerpendicularFiber'.

If this property is empty, then a value is computed and returned. The value is computed using the following:

           curviness = 0.1

◆ getEngagementAngleInDegrees()

double OpenSim::FiberCompressiveForceCosPennationCurve::getEngagementAngleInDegrees ( ) const

Returns: The pennation angle engagement angle of the fiber compressive force pennation curve.

◆ getStiffnessAtPerpendicularInUse()

double OpenSim::FiberCompressiveForceCosPennationCurve::getStiffnessAtPerpendicularInUse ( ) const

Returns: This is the stiffness of the compressive elastic force length spring when the pennation angle reaches 90 degrees. If this property has been set, the property value is returned. If this property is empty, then a value is computed and returned. The value is computed using the following:

           stiffnessAtPerpendicular = -2 * 1/cosd(engagementAngleInDegrees)

where cosd is a cosine function that takes its argument in units of degrees

◆ isFittedCurveBeingUsed()

bool OpenSim::FiberCompressiveForceCosPennationCurve::isFittedCurveBeingUsed ( ) const

Returns: true if the internal fitting routine (which takes only one argument, the engagementAngleInDegrees) is being used. False is returned if the user has set the optional parameters.

◆ printMuscleCurveToCSVFile()

void OpenSim::FiberCompressiveForceCosPennationCurve::printMuscleCurveToCSVFile ( const std::string & path )

This function will generate a csv file with a name that matches the curve name (e.g.

"bicepfemoris_FiberCompressiveForceCosPennationCurve.csv"). This function is not const to permit the curve to be rebuilt if it is out of date with its properties.

Parameters

path	The full path to the location. Note '/' slashes must be used, and do not put a '/' after the last folder.

The file will contain the following columns:

 Col# 1, 2,     3,       4,  
      x, y, dy/dx, d2y/dx2,

The curve will be sampled from its linear extrapolation region (the region with normalized fiber velocities < -1), through the curve, out to the other linear extrapolation region (the region with normalized fiber velocities > 1). The width of each linear extrapolation region is 10% of the entire range of x, or 0.1*(x1-x0).

The curve is sampled quite densely: there are 200+20 rows
Computational Costs

      ~194,800 flops

Example To read the csv file with a header in from Matlab, you need to use csvread set so that it will ignore the header row. This is accomplished by using the extra two numerical arguments for csvread to tell the function to begin reading from the 1st row, and the 0th index (csvread is 0 indexed). This is necessary to skip reading in the text header

  data=csvread('bicepfemoris_FiberCompressiveForceCosPennationCurve.csv',1,0);

◆ safeDownCast()

static FiberCompressiveForceCosPennationCurve* OpenSim::FiberCompressiveForceCosPennationCurve::safeDownCast ( OpenSim::Object * obj )

inlinestatic

For use in MATLAB and Python to access the concrete class.

Example: cObj = FiberCompressiveForceCosPennationCurve.safeDownCast(obj). This is equivalent to dynamic_cast<FiberCompressiveForceCosPennationCurve*>(obj) in C++.

◆ set_curviness()

void OpenSim::FiberCompressiveForceCosPennationCurve::set_curviness ( const double & value )

inline

Set the value of the curviness property.

◆ set_engagement_angle_in_degrees()

void OpenSim::FiberCompressiveForceCosPennationCurve::set_engagement_angle_in_degrees ( const double & value )

inline

Set the value of the engagement_angle_in_degrees property.

◆ set_stiffness_at_perpendicular()

void OpenSim::FiberCompressiveForceCosPennationCurve::set_stiffness_at_perpendicular ( const double & value )

inline

Set the value of the stiffness_at_perpendicular property.

◆ setEngagementAngleInDegrees()

void OpenSim::FiberCompressiveForceCosPennationCurve::setEngagementAngleInDegrees ( double aEngagementAngleInDegrees )

Parameters

aEngagementAngleInDegrees Sets the pennation angle engagement angle of the fiber compressive force pennation curve. Cost The curve is rebuilt at a cost of ~174,100 flops

◆ setOptionalProperties()

void OpenSim::FiberCompressiveForceCosPennationCurve::setOptionalProperties	(	double	aStiffnessAtPerpendicular,
		double	aCurviness
	)

Parameters

aStiffnessAtPerpendicular	This is the stiffness of the compressive elastic force length spring when the pennation angle reaches 90 degrees.
aCurviness	A dimensionless parameter between [0-1] that controls how the curve is drawn: 0 will create a curve that is very close to a straight line segment while a value of 1 will create a curve that smoothly fills the corner formed by the linear extrapolation of 'stiffnessAtOneNormForce' and the x axis as shown in the figure.

Cost The curve is rebuilt at a cost of ~174,100 flops

◆ upd_curviness()

double& OpenSim::FiberCompressiveForceCosPennationCurve::upd_curviness ( )

inline

Get a writable reference to the curviness property.

◆ upd_engagement_angle_in_degrees()

double& OpenSim::FiberCompressiveForceCosPennationCurve::upd_engagement_angle_in_degrees ( )

inline

Get a writable reference to the engagement_angle_in_degrees property.

◆ upd_stiffness_at_perpendicular()

double& OpenSim::FiberCompressiveForceCosPennationCurve::upd_stiffness_at_perpendicular ( )

inline

Get a writable reference to the stiffness_at_perpendicular property.

OpenSim Property, Socket, Output, Input Documentation

◆ curviness

double OpenSim::FiberCompressiveForceCosPennationCurve::curviness

"Fiber curve bend, from linear to maximum bend (0-1)"

This property appears in XML files under the tag <curviness>. This property was generated with the OpenSim_DECLARE_OPTIONAL_PROPERTY macro; see Property to learn about the property system.

See also: get_curviness(), upd_curviness(), set_curviness()

◆ engagement_angle_in_degrees

double OpenSim::FiberCompressiveForceCosPennationCurve::engagement_angle_in_degrees

"Engagement angle of the compressive pennation spring in degrees"

This property appears in XML files under the tag <engagement_angle_in_degrees>. This property was generated with the OpenSim_DECLARE_PROPERTY macro; see Property to learn about the property system.

See also: get_engagement_angle_in_degrees(), upd_engagement_angle_in_degrees(), set_engagement_angle_in_degrees()

◆ stiffness_at_perpendicular

double OpenSim::FiberCompressiveForceCosPennationCurve::stiffness_at_perpendicular

"Stiffness of the curve at pennation angle of 90 degrees"

This property appears in XML files under the tag <stiffness_at_perpendicular>. This property was generated with the OpenSim_DECLARE_OPTIONAL_PROPERTY macro; see Property to learn about the property system.

See also: get_stiffness_at_perpendicular(), upd_stiffness_at_perpendicular(), set_stiffness_at_perpendicular()

The documentation for this class was generated from the following file:

OpenSim/Actuators/FiberCompressiveForceCosPennationCurve.h

OpenSim Properties, Sockets, Outputs, Inputs

Public Member Functions

Public Types

Auto-generated functions

Additional Inherited Members

Detailed Description

Member Typedef Documentation

◆ Self

◆ Super

Constructor & Destructor Documentation

◆ FiberCompressiveForceCosPennationCurve() [1/3]

◆ FiberCompressiveForceCosPennationCurve() [2/3]

◆ FiberCompressiveForceCosPennationCurve() [3/3]

Member Function Documentation

◆ assign()

◆ calcDerivative() [1/2]

◆ calcDerivative() [2/2]

◆ calcIntegral()

◆ calcValue() [1/2]

◆ calcValue() [2/2]

◆ clone()

◆ ensureCurveUpToDate()

◆ get_curviness()

◆ get_engagement_angle_in_degrees()

◆ get_stiffness_at_perpendicular()

◆ getClassName()

◆ getConcreteClassName()

◆ getCurveDomain()

◆ getCurvinessInUse()

◆ getEngagementAngleInDegrees()

◆ getStiffnessAtPerpendicularInUse()

◆ isFittedCurveBeingUsed()

◆ printMuscleCurveToCSVFile()

◆ safeDownCast()

◆ set_curviness()

◆ set_engagement_angle_in_degrees()

◆ set_stiffness_at_perpendicular()

◆ setEngagementAngleInDegrees()

◆ setOptionalProperties()

◆ upd_curviness()

◆ upd_engagement_angle_in_degrees()

◆ upd_stiffness_at_perpendicular()

OpenSim Property, Socket, Output, Input Documentation

◆ curviness

◆ engagement_angle_in_degrees

◆ stiffness_at_perpendicular