org.simtk.molecularstructure.nucleicacid
Class Thymidylate

java.lang.Object
  org.simtk.molecularstructure.ResidueTypeClass
      org.simtk.molecularstructure.nucleicacid.Nucleotide
          org.simtk.molecularstructure.nucleicacid.Pyrimidine
              org.simtk.molecularstructure.nucleicacid.Thymidylate

All Implemented Interfaces:

ResidueType

public class Thymidylate
extends Pyrimidine

Field Summary

Fields inherited from class org.simtk.molecularstructure.nucleicacid.Nucleotide

baseGroup, phosphateGroup, sugarGroup

Fields inherited from class org.simtk.molecularstructure.ResidueTypeClass

genericBonds, oneLetterCode, residueName, threeLetterCode, UNKNOWN_RESIDUE_TYPE

Constructor Summary

Thymidylate()

Method Summary

java.util.Set<java.lang.String>

getHydrogenBondAcceptorAtomNames()

Methods inherited from class org.simtk.molecularstructure.nucleicacid.Pyrimidine

addGenericBonds

Methods inherited from class org.simtk.molecularstructure.nucleicacid.Nucleotide

getHydrogenBondDonorAtomNames

Methods inherited from class org.simtk.molecularstructure.ResidueTypeClass

addGenericBond, genericBonds, getOneLetterCode, getResidueName, getThreeLetterCode, getType

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Thymidylate

public Thymidylate()

Method Detail

getHydrogenBondAcceptorAtomNames

public java.util.Set<java.lang.String> getHydrogenBondAcceptorAtomNames()

Specified by:

getHydrogenBondAcceptorAtomNames in interface ResidueType

Overrides:

getHydrogenBondAcceptorAtomNames in class Pyrimidine