org.simtk.moleculargraphics.cartoon
Class BasePairOval

java.lang.Object
  org.simtk.moleculargraphics.cartoon.ActorCartoonClass
      org.simtk.moleculargraphics.cartoon.GlyphCartoon
          org.simtk.moleculargraphics.cartoon.TensorGlyphCartoon
              org.simtk.moleculargraphics.cartoon.BasePairOval

All Implemented Interfaces:

ActorCartoon, BaseCartoon, ResidueHighlightListener

Direct Known Subclasses:

BasePairBrick

public class BasePairOval
extends TensorGlyphCartoon

Field Summary

protected double	height
protected double	width

Fields inherited from class org.simtk.moleculargraphics.cartoon.GlyphCartoon

highlightFactor

Fields inherited from class org.simtk.moleculargraphics.cartoon.ActorCartoonClass

actor, highlightActor, highlightMapper, highlightToonColors, invisibleColorScheme, isPopulated, mapper

Constructor Summary

BasePairOval()

Method Summary

void	addBasePair(BasePair basePair)
void	addMolecule(Molecule molecule)
void	addNucleicAcid(NucleicAcid molecule)
void	addNucleotide(Residue res1, Residue res2)

Methods inherited from class org.simtk.moleculargraphics.cartoon.TensorGlyphCartoon

colorByScalar, orientByNormal, scaleByNormal, scaleNone, setGlyphSource

Methods inherited from class org.simtk.moleculargraphics.cartoon.ActorCartoonClass

colorToon, colorToon, getActor, getChemicalFromScalar, getColorIndex, getHighlightActor, getMapper, highlightResidue, highlightResidueByAtomScalars, highlightResidueByResidueScalars, isPopulated, unhighlightResidue, unhighlightResidueByAtomScalars, unhighlightResidueByResidueScalars, unhighlightResidues

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

height

protected double height

width

protected double width

Constructor Detail

BasePairOval

public BasePairOval()

Method Detail

addMolecule

public void addMolecule(Molecule molecule)

Specified by:

addMolecule in class GlyphCartoon

addNucleicAcid

public void addNucleicAcid(NucleicAcid molecule)

addBasePair

public void addBasePair(BasePair basePair)

addNucleotide

public void addNucleotide(Residue res1,
                          Residue res2)