org.simtk.molecularstructure
Interface Biopolymer

All Superinterfaces:

Chemical, MassBody, Molecular, Molecule

All Known Subinterfaces:

LocatedProtein, Protein

All Known Implementing Classes:

BiopolymerClass, DNA, NucleicAcid, PDBProteinClass, RNA

public interface Biopolymer
extends Molecule

Method Summary

Residue	getResidue(int i)
Residue	getResidueByNumber(int i)
java.util.List<Residue>	residues()
java.util.Set<SecondaryStructure>	secondaryStructures()

Methods inherited from interface org.simtk.molecularstructure.Molecule

getDisplaySourceTypes, getPdbChainId, isSolvent, setDisplaySourceTypes

Methods inherited from interface org.simtk.molecularstructure.Molecular

atoms, bestPlane3D

Methods inherited from interface org.simtk.geometry3d.MassBody

getCenterOfMass, getMass

Method Detail

getResidue

Residue getResidue(int i)

getResidueByNumber

Residue getResidueByNumber(int i)

secondaryStructures

java.util.Set<SecondaryStructure> secondaryStructures()

residues

java.util.List<Residue> residues()