Trending Projects
Thoracoscapular muscle contributions to shoulder movement and work.
A shoulder model with an accurate scapulothoracicjoint and includes scapular muscles to drive its
motion. The model can be used to compute the work
done by the thoracoscapular muscles during
shrugging and any arm elevation task.
Forum posts last week: 1
SCONE: Open Source Software for Predictive Simulation
<imgsrc="https://scone.software/scone_window.png&
quot; alt="SCONE">SCONE is free and
open-source software for <b>predictive
simulation</b> of human and animal
motion. With SCONE, you can define and optimize
<b>neuromuscular controllers</b> to
optimally perform a specific task, according to
<b>high-level objectives</b> such as
walking speed and energy efficiency. Please
visit the <a
href="https://scone.software">SCONE
homepage</a> for more information, or check
<a
href="https://scone.software/doku.php?id=chan
ges">what's new</a> in the latest
version.
Total followers: 35
New followers: 1
Open Knee(s): Virtual Biomechanical Representations of the Knee Joint
Open Knee(s) goals have been to provide freeaccess to three-dimensional finite element
representations of the knee joint and promote open
development of knee models for collaborative
testing and use. <B>Definitive Guide to
Project and Its Outcomes</B> Open Knee(s): A
Free and Open Source Library of Specimen-Specific
Models and Related Digital Assets for Finite
Element Analysis of the Knee Joint. Chokhandre S,
Schwartz A, Klonowski E, Landis B, Erdemir A. Ann
Biomed Eng. 2023 Jan;51(1):10-23. (<A
HREF="https://doi.org/10.1007/s10439-022-0307
4-0">https://doi.org/10.1007/s10439-022-03
074-0</A>) <B>Definitive Guide to
Open Knee(s) Data</B> Specimen specific
imaging and joint mechanical testing data for next
generation virtual knees. Chokhandre S, Neumann
EE, Nagle TF, Colbrunn RW, Flask CA, Colak C,
Halloran J, Erdemir A. Data Brief. 2021 Jan
30;35:106824. (<A
HREF="https://doi.org/10.1016/j.dib.2021.1068
24">https://doi.org/10.1016/j.dib.2021.106
824</A>) <B>Database of Open
Knee(s) Models</B> Under Downloads ->
Data Share -> View -> OKS_models and at
(<A
HREF="https://doi.org/10.18735/b0zv-n395"
;>https://doi.org/10.18735/b0zv-n395</A>)
<B>Database of Open Knee(s)
Data</B> Growing version under Downloads
-> Data Share -> View -> Open Knees Data;
permanent static version at (<A
HREF="https://doi.org/10.18735/4e78-1311"
;>https://doi.org/10.18735/4e78-1311</A>)
Downloads last week: 189
Total followers: 47
Total downloads: 147,337
Marker registration method informed by anatomical reference frame orientations
A systematic method for marker registration,informed by anatomical reference frame
orientations, reduces subjective user input and
can make marker registration more accurate and
repeatable
New followers: 1
OpenArm: Volumetric & Time Series Models of Muscle Deformation
The OpenArm data sets are designed to enable studyof force- and kinematic-induced muscle deformation
for applications in biomechanics research,
computer graphics, and assistive device
development. **NEW:** The OpenArm Multisensor
2.0 data set contains new time series of
ultrasound-measured brachioradialis deformation,
surface electromyography (sEMG)-measured
activation, force, and goal trajectory data, for
various force-, deformation-, and activation-based
trajectory tracking tasks, under refined
conditions from those of the 1.0 data set. Also
included are all analysis, real-time muscle
deformation tracking, and display code. The
OpenArm Multisensor 1.0 data set contains time
series cross-sectional ultrasound scans of the
brachioradialis muscle under variable elbow
loading, alongside corresponding surface
electromyography (sEMG), acoustic myography (AMG),
and force data. The OpenArm 1.0 and 2.0 data
sets encompass factorial sets of volumetric scans
of the arm, generated using ultrasound and motion
capture, that allow for analysis of both force-
and configuration-associated muscle deformation.
Downloads last week: 80
Total downloads: 15,785
Evertor and invertor muscle co-activation prevents ankle inversion injury
This paper identifies that planned co-activationof the ankle invertors and evertors may protect
the ankle from rapid inversion injuries, while
even the fastest stretch reflexes in these muscle
are likely too slow.
New followers: 1
Muscle-actuated Simulation of Human Running
The purpose of this study was to determine howmuscles contribute to propulsion (i.e., the
fore-aft acceleration) and support (i.e., the
vertical acceleration) of the body mass center
during running.
Forum posts last week: 1
Total followers: 42
Total downloads: 26,371
Practical Annotation and Exchange of Virtual Anatomy
This site serves for dissemination of aeva and itsuse cases. aeva is a free and open source software
for annotation and exchange of virtual anatomy.
The use cases drive design and testing of aeva
features and demonstrate various workflows that
rely on virtual anatomy.
Downloads last week: 50
Whole-Cell Computational Model of Mycoplasma genitalium
This project provides all code and data for thefirst "whole-cell" model of the entire life cycle
of a living organism, Mycoplasma
genitalium.
Downloads last week: 2,077
Total downloads: 288,550
OpenSim Moco
OpenSim Moco solves optimal control problems withmusculoskeletal models defined in OpenSim, using
direct collocation.
Forum posts last week: 2
Multi-segment Foot and ankle model validated using biplanar videoradiography
A multi-segment foot and ankle model consisting ofthe tibia, talus, calcaneus, midfoot, forefoot and
toes, with a total of 7 degrees of freedom. Motion
between segments were constrained such that all
joints except for the ankle were modelled as a
revolut
Downloads last week: 46
Model of the Scapulothoracic Joint
Provide an OpenSim Joint model that enables a moreaccurate representation of scapula mechanics in
musculoskeletal simulations.
Total followers: 30
Total downloads: 10,686
MMB (MacroMoleculeBuilder)
Easily model the structure and dynamics ofmacromolecules
Downloads last week: 38
SimVascular: Examples and Clinical Cases
Download examples and clinical case files forcardiovascular modeling and simulation compatible
with SimVascular
Downloads last week: 66
New followers: 1
Total downloads: 14,848
OpenCap
OpenCap is a software package to estimate 3D humanmovement dynamics from smartphone videos.
Forum posts last week: 10
New followers: 1
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Biological applications
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Jobs
PhD Position in Neuromusculoskeletal Modeling
Rice Computational Neuromechanics Lab
Jul 20, 2024
Jul 20, 2024
The Rice Computational Neuromechanics Lab directed by B.J. Fregly is seeking to hire a new PhD student with the appointment beginning as soon as possible.