Molmodel

SimTK::MolecularMechanicsSystem Member List

This is the complete list of members for SimTK::MolecularMechanicsSystem, including all inherited members.
addEventHandler(ScheduledEventHandler *handler)SimTK::System
addEventHandler(TriggeredEventHandler *handler)SimTK::System
addEventReporter(ScheduledEventReporter *handler) const SimTK::System
addEventReporter(TriggeredEventReporter *handler) const SimTK::System
addForceSubsystem(ForceSubsystem &)SimTK::MultibodySystem
adoptSubsystem(Subsystem &child)SimTK::System
adoptSystemGuts(System::Guts *g)SimTK::System
calcDecorativeGeometryAndAppend(const State &, Stage, Array_< DecorativeGeometry > &) const SimTK::System
calcEnergy(const State &s) const SimTK::MultibodySystem
calcEventTriggerInfo(const State &, Array_< EventTriggerInfo > &) const SimTK::System
calcKineticEnergy(const State &) const SimTK::MultibodySystem
calcPotentialEnergy(const State &) const SimTK::MultibodySystem
calcSystemMassCenterLocation(const State &state) const SimTK::MolecularMechanicsSystem
calcSystemRigidBodyMomentum(const State &state) const SimTK::MolecularMechanicsSystem
calcTimeOfNextScheduledEvent(const State &, Real &tNextEvent, Array_< EventId > &eventIds, bool includeCurrentTime) const SimTK::System
calcTimeOfNextScheduledReport(const State &, Real &tNextEvent, Array_< EventId > &eventIds, bool includeCurrentTime) const SimTK::System
calcTimescale(const State &) const SimTK::System
calcWeightedInfinityNorm(const Vector &values, const Vector &weights)SimTK::System [static]
calcWeightedRMSNorm(const Vector &values, const Vector &weights)SimTK::System [static]
calcYErrUnitTolerances(const State &, Vector &tolerances) const SimTK::System
calcYUnitWeights(const State &, Vector &weights) const SimTK::System
getContactSubsystem() const SimTK::MultibodySystem
getDecorationSubsystem() const SimTK::MultibodySystem
getDefaultState() const SimTK::System
getDefaultSubsystem() const SimTK::System
getMatterSubsystem() const SimTK::MultibodySystem
getMobilityForces(const State &, Stage) const SimTK::MultibodySystem
getMolecularMechanicsForceSubsystem() const SimTK::MolecularMechanicsSystem
getName() const SimTK::System
getNumHandleEventCalls() const SimTK::System
getNumHandlerCallsThatChangedStage(Stage) const SimTK::System
getNumPrescribeCalls() const SimTK::System
getNumProjectCalls() const SimTK::System
getNumQErrorEstimateProjections() const SimTK::System
getNumQProjections() const SimTK::System
getNumRealizationsOfThisStage(Stage) const SimTK::System
getNumRealizeCalls() const SimTK::System
getNumReportEventCalls() const SimTK::System
getNumSubsystems() const SimTK::System
getNumUErrorEstimateProjections() const SimTK::System
getNumUProjections() const SimTK::System
getParticleForces(const State &, Stage) const SimTK::MultibodySystem
getRep() const SimTK::MultibodySystem
getRigidBodyForces(const State &, Stage) const SimTK::MultibodySystem
getSubsystem(SubsystemIndex) const SimTK::System
getSystemGuts() const SimTK::System
getUpDirection() const SimTK::System
getUseUniformBackground() const SimTK::System
getVersion() const SimTK::System
GutsSimTK::System [friend]
handleEvents(State &, Event::Cause, const Array_< EventId > &eventIds, Real accuracy, const Vector &yWeights, const Vector &cWeights, Stage &lowestModified, bool &shouldTerminate) const SimTK::System
hasContactSubsystem() const SimTK::MultibodySystem
hasDecorationSubsystem() const SimTK::MultibodySystem
hasGuts() const SimTK::System
hasMatterSubsystem() const SimTK::MultibodySystem
hasTimeAdvancedEvents() const SimTK::System
isEmptyHandle() const SimTK::System
isOwnerHandle() const SimTK::System
isSameSystem(const System &otherSystem) const SimTK::System
MolecularMechanicsSystem()SimTK::MolecularMechanicsSystem
MolecularMechanicsSystem(SimbodyMatterSubsystem &, DuMMForceFieldSubsystem &)SimTK::MolecularMechanicsSystem
moveSystemMassCenter(State &state, const Vec3 &newCOMLocation) const SimTK::MolecularMechanicsSystem
MultibodySystem()SimTK::MultibodySystem
MultibodySystem(SimbodyMatterSubsystem &m)SimTK::MultibodySystem
MultibodySystem(MultibodySystemRep *)SimTK::MultibodySystem [protected]
operator const Subsystem &() const SimTK::System
operator Subsystem &()SimTK::System
operator=(const System &)SimTK::System
prescribe(State &, Stage) const SimTK::System
project(State &, Real consAccuracy, const Vector &yWeights, const Vector &cWeights, Vector &yerrest, ProjectOptions=ProjectOptions::All) const SimTK::System
realize(const State &s, Stage g=Stage::HighestRuntime) const SimTK::System
realizeModel(State &) const SimTK::System
realizeTopology() const SimTK::System
relax(State &, Stage, Real accuracy, const Vector &yWeights, const Vector &cWeights) const SimTK::System
removeSystemRigidBodyMomentum(State &state, bool linearOnly=false) const SimTK::MolecularMechanicsSystem
reportEvents(const State &s, Event::Cause cause, const Array_< EventId > &eventIds) const SimTK::System
resetAllCountersToZero()SimTK::System
setContactSubsystem(GeneralContactSubsystem &)SimTK::MultibodySystem
setDecorationSubsystem(DecorationSubsystem &)SimTK::MultibodySystem
setHasTimeAdvancedEvents(bool)SimTK::System
setMatterSubsystem(SimbodyMatterSubsystem &)SimTK::MultibodySystem
setMolecularMechanicsForceSubsystem(DuMMForceFieldSubsystem &)SimTK::MolecularMechanicsSystem
setUpDirection(const CoordinateDirection &up)SimTK::System
setUseUniformBackground(bool useUniformBackground)SimTK::System
SimTK_PIMPL_DOWNCAST(MolecularMechanicsSystem, System)SimTK::MolecularMechanicsSystem
SimTK::MultibodySystem::SimTK_PIMPL_DOWNCAST(MultibodySystem, System)SimTK::MultibodySystem
System()SimTK::System
System(const System &)SimTK::System
System(System::Guts *g)SimTK::System
systemTopologyHasBeenRealized() const SimTK::System
updContactSubsystem()SimTK::MultibodySystem
updDecorationSubsystem()SimTK::MultibodySystem
updDefaultState()SimTK::System
updDefaultSubsystem()SimTK::System
updMatterSubsystem()SimTK::MultibodySystem
updMobilityForces(const State &, Stage) const SimTK::MultibodySystem
updMolecularMechanicsForceSubsystem()SimTK::MolecularMechanicsSystem
updParticleForces(const State &, Stage) const SimTK::MultibodySystem
updRep()SimTK::MultibodySystem
updRigidBodyForces(const State &, Stage) const SimTK::MultibodySystem
updSubsystem(SubsystemIndex)SimTK::System
updSystemGuts()SimTK::System
~System()SimTK::System
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