OpenMM: Class Members

- g -

getAcceptorParameters() : CustomHbondForce
getAEwald() : AmoebaMultipoleForce
getAmoebaGlobalHarmonicAngleCubic() : AmoebaHarmonicAngleForce
getAmoebaGlobalHarmonicAnglePentic() : AmoebaHarmonicAngleForce
getAmoebaGlobalHarmonicAngleQuartic() : AmoebaHarmonicAngleForce
getAmoebaGlobalHarmonicAngleSextic() : AmoebaHarmonicAngleForce
getAmoebaGlobalHarmonicBondCubic() : AmoebaHarmonicBondForce
getAmoebaGlobalHarmonicBondQuartic() : AmoebaHarmonicBondForce
getAmoebaGlobalHarmonicInPlaneAngleCubic() : AmoebaHarmonicInPlaneAngleForce
getAmoebaGlobalHarmonicInPlaneAnglePentic() : AmoebaHarmonicInPlaneAngleForce
getAmoebaGlobalHarmonicInPlaneAngleQuartic() : AmoebaHarmonicInPlaneAngleForce
getAmoebaGlobalHarmonicInPlaneAngleSextic() : AmoebaHarmonicInPlaneAngleForce
getAmoebaGlobalOutOfPlaneBendCubic() : AmoebaOutOfPlaneBendForce
getAmoebaGlobalOutOfPlaneBendPentic() : AmoebaOutOfPlaneBendForce
getAmoebaGlobalOutOfPlaneBendQuartic() : AmoebaOutOfPlaneBendForce
getAmoebaGlobalOutOfPlaneBendSextic() : AmoebaOutOfPlaneBendForce
getAmoebaGlobalUreyBradleyCubic() : AmoebaUreyBradleyForce
getAmoebaGlobalUreyBradleyQuartic() : AmoebaUreyBradleyForce
getAngleParameters() : AmoebaHarmonicAngleForce , AmoebaHarmonicInPlaneAngleForce , CustomAngleForce , HarmonicAngleForce
getAwater() : AmoebaWcaDispersionForce
getBondParameters() : AmoebaHarmonicBondForce , CustomBondForce , GBVIForce , GBVISoftcoreForce , HarmonicBondForce
getBornRadiusScalingMethod() : GBVIForce , GBVISoftcoreForce
getBoxVectors() : AmberInpcrdFile
getBySymbol() : Element
getComputationStep() : CustomIntegrator
getComputedValueParameters() : CustomGBForce
getConstraintParameters() : System
getConstraintTolerance() : Integrator
getCovalentMap() : AmoebaMultipoleForce
getCovalentMaps() : AmoebaMultipoleForce
getCutoff() : AmoebaVdwForce
getCutoffDistance() : AmoebaMultipoleForce , CustomGBForce , CustomHbondForce , CustomNonbondedForce , GBSAOBCForce , GBSAOBCSoftcoreForce , GBVIForce , GBVISoftcoreForce , NonbondedForce , NonbondedSoftcoreForce
getDefaultCollisionFrequency() : AndersenThermostat
getDefaultPeriodicBoxVectors() : System
getDefaultPluginsDirectory() : Platform
getDefaultPressure() : MonteCarloBarostat
getDefaultTemperature() : AndersenThermostat
getDispoff() : AmoebaWcaDispersionForce
getDonorParameters() : CustomHbondForce
getEnergyFunction() : CustomAngleForce , CustomBondForce , CustomExternalForce , CustomHbondForce , CustomNonbondedForce , CustomTorsionForce
getEnergyTermParameters() : CustomGBForce
getEpsh() : AmoebaWcaDispersionForce
getEpsilonCombiningRule() : AmoebaVdwForce
getEpso() : AmoebaWcaDispersionForce
getErrorTolerance() : VariableLangevinIntegrator , VariableVerletIntegrator
getEwaldErrorTolerance() : AmoebaMultipoleForce , NonbondedForce
getExceptionParameters() : NonbondedForce , NonbondedSoftcoreForce
getExclusionParticles() : CustomGBForce , CustomHbondForce , CustomNonbondedForce
getForce() : System
getForceGroup() : Force
getForces() : State
getFrequency() : CMMotionRemover , MonteCarloBarostat
getFriction() : BrownianIntegrator , LangevinIntegrator , RPMDIntegrator , VariableLangevinIntegrator
getFunctionParameters() : CustomGBForce , CustomHbondForce , CustomNonbondedForce
getGlobalParameterDefaultValue() : CustomAngleForce , CustomBondForce , CustomExternalForce , CustomGBForce , CustomHbondForce , CustomNonbondedForce , CustomTorsionForce
getGlobalParameterName() : CustomAngleForce , CustomBondForce , CustomExternalForce , CustomGBForce , CustomHbondForce , CustomNonbondedForce , CustomTorsionForce
getGlobalVariable() : CustomIntegrator
getGlobalVariableName() : CustomIntegrator
getIncludeCavityTerm() : AmoebaGeneralizedKirkwoodForce
getIntegrator() : Context
getKineticEnergy() : State
getMapParameters() : CMAPTorsionForce
getMultipoleParameters() : AmoebaMultipoleForce
getMutualInducedMaxIterations() : AmoebaMultipoleForce
getMutualInducedTargetEpsilon() : AmoebaMultipoleForce
getName() : Platform
getNonbondedMethod() : AmoebaMultipoleForce , CustomGBForce , CustomHbondForce , CustomNonbondedForce , GBSAOBCForce , GBSAOBCSoftcoreForce , GBVIForce , GBVISoftcoreForce , NonbondedForce , NonbondedSoftcoreForce
getNonPolarPrefactor() : GBSAOBCSoftcoreForce
getNumAcceptors() : CustomHbondForce
getNumAngles() : AmoebaHarmonicAngleForce , AmoebaHarmonicInPlaneAngleForce , CustomAngleForce , HarmonicAngleForce
getNumBonds() : AmoebaHarmonicBondForce , CustomBondForce , GBVIForce , GBVISoftcoreForce , HarmonicBondForce
getNumComputations() : CustomIntegrator
getNumComputedValues() : CustomGBForce
getNumConstraints() : System
getNumCopies() : RPMDIntegrator
getNumDonors() : CustomHbondForce
getNumEnergyTerms() : CustomGBForce
getNumExceptions() : NonbondedForce , NonbondedSoftcoreForce
getNumExclusions() : CustomGBForce , CustomHbondForce , CustomNonbondedForce
getNumForces() : System
getNumFunctions() : CustomGBForce , CustomHbondForce , CustomNonbondedForce
getNumGlobalParameters() : CustomAngleForce , CustomBondForce , CustomExternalForce , CustomGBForce , CustomHbondForce , CustomNonbondedForce , CustomTorsionForce
getNumGlobalVariables() : CustomIntegrator
getNumInteractions() : AmoebaUreyBradleyForce
getNumMaps() : CMAPTorsionForce
getNumMultipoles() : AmoebaMultipoleForce
getNumOutOfPlaneBends() : AmoebaOutOfPlaneBendForce
getNumParticles() : NonbondedSoftcoreForce , GBSAOBCSoftcoreForce , AmoebaGeneralizedKirkwoodForce , AmoebaVdwForce , AmoebaWcaDispersionForce , CustomExternalForce , CustomGBForce , CustomNonbondedForce , GBSAOBCForce , GBVIForce , GBVISoftcoreForce , NonbondedForce , VirtualSite , System
getNumPerAcceptorParameters() : CustomHbondForce
getNumPerAngleParameters() : CustomAngleForce
getNumPerBondParameters() : CustomBondForce
getNumPerDofVariables() : CustomIntegrator
getNumPerDonorParameters() : CustomHbondForce
getNumPerParticleParameters() : CustomExternalForce , CustomGBForce , CustomNonbondedForce
getNumPerTorsionParameters() : CustomTorsionForce
getNumPiTorsions() : AmoebaPiTorsionForce
getNumPlatforms() : Platform
getNumStretchBends() : AmoebaStretchBendForce
getNumTorsions() : AmoebaTorsionForce , CustomTorsionForce , PeriodicTorsionForce , RBTorsionForce , CMAPTorsionForce
getNumTorsionTorsionGrids() : AmoebaTorsionTorsionForce
getNumTorsionTorsions() : AmoebaTorsionTorsionForce
getOpenMMVersion() : Platform
getOutOfPlaneBendParameters() : AmoebaOutOfPlaneBendForce
getParameter() : Context
getParameters() : State
getParticle() : VirtualSite
getParticleExclusions() : AmoebaVdwForce
getParticleMass() : System
getParticleParameters() : GBSAOBCSoftcoreForce , GBSAOBCForce , AmoebaGeneralizedKirkwoodForce , AmoebaVdwForce , AmoebaWcaDispersionForce , CustomNonbondedForce , CustomGBForce , GBVIForce , GBVISoftcoreForce , NonbondedForce , CustomExternalForce , NonbondedSoftcoreForce
getPBC() : AmoebaVdwForce
getPerAcceptorParameterName() : CustomHbondForce
getPerAngleParameterName() : CustomAngleForce
getPerBondParameterName() : CustomBondForce
getPerDofVariable() : CustomIntegrator
getPerDofVariableName() : CustomIntegrator
getPerDonorParameterName() : CustomHbondForce
getPeriodicBoxVectors() : State
getPerParticleParameterName() : CustomGBForce , CustomNonbondedForce , CustomExternalForce
getPerTorsionParameterName() : CustomTorsionForce
getPiTorsionParameters() : AmoebaPiTorsionForce
getPlatform() : Platform , Context
getPlatformByName() : Platform
getPmeBSplineOrder() : AmoebaMultipoleForce
getPmeGridDimensions() : AmoebaMultipoleForce
getPolarizationType() : AmoebaMultipoleForce
getPositions() : Modeller , State , PDBFile , AmberInpcrdFile
getPotentialEnergy() : State
getProbeRadius() : AmoebaGeneralizedKirkwoodForce
getPropertyDefaultValue() : Platform
getPropertyNames() : Platform
getPropertyValue() : Platform
getQuinticLowerLimitFactor() : GBVIForce , GBVISoftcoreForce
getQuinticUpperBornRadiusLimit() : GBVIForce , GBVISoftcoreForce
getRandomNumberSeed() : RPMDIntegrator , LangevinIntegrator , CustomIntegrator , VariableLangevinIntegrator , AndersenThermostat , MonteCarloBarostat , BrownianIntegrator
getReactionFieldDielectric() : NonbondedForce , NonbondedSoftcoreForce
getReciprocalSpaceForceGroup() : NonbondedForce
getRminh() : AmoebaWcaDispersionForce
getRmino() : AmoebaWcaDispersionForce
getShctd() : AmoebaWcaDispersionForce
getSigmaCombiningRule() : AmoebaVdwForce
getSlevy() : AmoebaWcaDispersionForce
getSoluteDielectric() : GBVISoftcoreForce , GBSAOBCForce , GBVIForce , GBSAOBCSoftcoreForce , AmoebaGeneralizedKirkwoodForce
getSolventDielectric() : AmoebaGeneralizedKirkwoodForce , GBSAOBCSoftcoreForce , GBVIForce , GBVISoftcoreForce , GBSAOBCForce
getSpeed() : Platform
getState() : Context , RPMDIntegrator
getStepSize() : Integrator
getStretchBendParameters() : AmoebaStretchBendForce
getSurfaceAreaFactor() : AmoebaGeneralizedKirkwoodForce
getSystem() : Context
getTemperature() : LangevinIntegrator , RPMDIntegrator , VariableLangevinIntegrator , MonteCarloBarostat , BrownianIntegrator
getTime() : State
getTopology() : Modeller , PDBFile
getTorsionParameters() : CMAPTorsionForce , RBTorsionForce , PeriodicTorsionForce , CustomTorsionForce , AmoebaTorsionForce
getTorsionTorsionGrid() : AmoebaTorsionTorsionForce
getTorsionTorsionParameters() : AmoebaTorsionTorsionForce
getUnitCellDimensions() : Topology
getUreyBradleyParameters() : AmoebaUreyBradleyForce
getUseDispersionCorrection() : NonbondedForce
getUseNeighborList() : AmoebaVdwForce
getVelocities() : AmberInpcrdFile , State
getVirtualSite() : System
getWeight() : ThreeParticleAverageSite , TwoParticleAverageSite
getWeight12() : OutOfPlaneSite
getWeight13() : OutOfPlaneSite
getWeightCross() : OutOfPlaneSite