internal Directory Reference

Files

file  AtomSubsystem.h [code]
file  Biotype.h [code]
file  bondGeometry.h [code]
file  Clonable.h [code]
file  molmodel/internal/common.h [code]
 

Every Molmodel header and source file should include this header before any other Molmodel header.


file  Compound.h [code]
file  CompoundModeler.h [code]
file  CompoundSystem.h [code]
file  DuMMForceFieldSubsystem.h [code]
 

Define the public interface to DuMMForceFieldSubsystem, a subsystem which provides some minimal molecular mechanics-like capability in a multi-rigid body framework.


file  Element.h [code]
file  GrinPointer.h [code]
file  Ions.h [code]
file  LigandDroplet.h [code]
file  Ligands.h [code]
file  MassCenterMotionRemover.h [code]
file  MolecularMechanicsSystem.h [code]
file  NoseHooverThermostat.h [code]
file  Pdb.h [code]
file  PDBReader.h [code]
file  PeriodicPdbWriter.h [code]
file  PeriodicVmdReporter.h [code]
file  Protein.h [code]
file  RiboseMobilizer.h [code]
file  RNA.h [code]
file  Superpose.h [code]
 

Kabsch superposition algorithm implementation.


file  units.h [code]
file  VanDerWaalsForce.h [code]
file  VanderWallSphere.h [code]
file  VelocityRescalingThermostat.h [code]
file  VmdConnection.h [code]
file  VoxelHash.h [code]
file  Water.h [code]
file  WaterDroplet.h [code]

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