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Documents
Class Diagram
OpenMM Class Diagram
Mar 3, 2014
Author:
Lee-Ping Wang
A descriptive diagram of concepts and relationships in OpenMM.
Manuals
This folder is empty.
Slides, Videos, and Other Materials from Workshops
1. March 2014 Molecular Dynamics Workshop
Workshop Presentation Slides
Mar 3, 2014
Author:
Joy Ku
Workshop Tutorials
Mar 3, 2014
Author:
Joy Ku
2. Previous Workshop Material
March2013 Workshop Presentations
Mar 3, 2013
Author:
Joy Ku
Developer Workshop -- February 12, 2009
1a -- Slides: Welcome and Introduction -- Vijay Pande
Feb 2, 2009
Author:
Blanca Pineda
1b -- Video: Welcome and Introduction -- Vijay Pande
Feb 2, 2009
Author:
Blanca Pineda
2a -- Slides: Introduction of OpenMM -- Vijay Pande
Feb 2, 2009
Author:
Blanca Pineda
2b -- Video: Introduction of OpenMM -- Vijay Pande
Feb 2, 2009
Author:
Blanca Pineda
5a -- Slides: ATI Presentation -- Mike Houston
Feb 2, 2009
Author:
Joy Ku
6b -- Video: Introduction to the OpenMM integration into Gromacs -- Peter Eastman
Feb 2, 2009
Author:
Blanca Pineda
MD Symposium -- February 13, 2009
1a -- Slides: Introduction to Molecular Dynamics -- Vijay Pande
Feb 2, 2009
Author:
Blanca Pineda
1b -- Video: Introduction to Molecular Dynamics -- Vijay Pande
Feb 2, 2009
Author:
Blanca Pineda
2a -- Slides: OpenMM/Zephyr introduction/demo/tutorial -- Christopher Bruns
Feb 2, 2009
Author:
Blanca Pineda
2b -- Video: OpenMM/Zephyr introduction/demo/tutorial -- Christopher Bruns
Feb 2, 2009
Author:
Blanca Pineda
3a -- Slides: Introduction to Advanced Topics -- Vijay Pande
Feb 2, 2009
Author:
Blanca Pineda
3b -- Video: Introduction to Advanced Topics -- Vijay Pande
Mar 3, 2009
Author:
Blanca Pineda
4a -- Slides: Introduction to and Hands-on OpenMM/MDrun -- Mark Friedrichs and Peter Eastman
Feb 2, 2009
Author:
Blanca Pineda
4b -- Video: Introduction to and Hands-on OpenMM/MDrun -- Mark Friedrichs and Peter Eastman
Feb 2, 2009
Author:
Blanca Pineda
Rapid Prototyping and Simulations on GPU Workshop, Day 1 -- September 6-7, 2012
1a -- Slides: Introduction to Running Simulations with OpenMM -- Peter Eastman
Feb 2, 2013
Author:
Claudia McClure
1b -- Video: Introduction to Running Simulations with OpenMM -- Peter Eastman
Feb 2, 2013
Author:
Claudia McClure
2a -- Slides: Exercises - Running Simulations with OpenMM -- Diwakar Shukla
Feb 2, 2013
Author:
Claudia McClure
2b -- Video: Exercises - Running Simulations with OpenMM -- Diwakar Shukla
Feb 2, 2013
Author:
Claudia McClure
3a -- Slides: Introduction to the OpenMM API -- Peter Eastman
Feb 2, 2013
Author:
Claudia McClure
3b -- Video: Introduction to the OpenMM API - Peter Eastman
Feb 2, 2013
Author:
Claudia McClure
4a -- Slides: Exercises - Customizing Forces and Integrators with OpenMM -- Peter Eastman
Feb 2, 2013
Author:
Claudia McClure
4b -- Video: Exercises - Customizing Forces and Integrators with OpenMM -- Peter Eastman
Feb 2, 2013
Author:
Claudia McClure
5a -- Slides: Exercise - Using AMOEBA Polarizable Force Fields -- Lee-Ping Wang
Feb 2, 2013
Author:
Claudia McClure
5b -- Video: Exercise - Using AMOEBA Polarizable Force Fields -- Lee-Ping Wang
Feb 2, 2013
Author:
Claudia McClure
6a -- Slides: Creating and Using Force Fields for New Molecules -- Lee-Ping Wang
Feb 2, 2013
Author:
Claudia McClure
Rapid Prototyping and Simulations on GPU Workshop, Day 2 -- September 6-7, 2012
1a -- Slides: Validation of OpenMM -- Peter Eastman
Feb 2, 2013
Author:
Claudia McClure
1b -- Video: Validation of OpenMM -- Peter Eastman
Feb 2, 2013
Author:
Claudia McClure
2a -- Slides: Force Field Parameterization -- Lee-Ping Wang
Feb 2, 2013
Author:
Claudia McClure
2b -- Video: Force Field Parameterization -- Lee-Ping Wang
Feb 2, 2013
Author:
Claudia McClure
3a -- Slides: Free Energy Calculations and OpenMM -- Lee-Ping Wang
Feb 2, 2013
Author:
Claudia McClure
3b -- Video: Free Energy Calculations and OpenMM -- Lee-Ping Wang
Feb 2, 2013
Author:
Claudia McClure
4a -- Slides: Introduction to Markov State Models for Trajectory Analysis -- Kyle Beauchamp and Robert McGibbon
Feb 2, 2013
Author:
Claudia McClure
4b -- Video: Introduction to Markov State Models for Trajectory Analysis -- Kyle Beauchamp and Robert McGibbon
Feb 2, 2013
Author:
Claudia McClure
Uncategorized Submissions
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Last updated
Mar 1, 2024
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