Muscle-actuated Simulation of Human Running

The purpose of this study was to determine how
muscles contribute to propulsion (i.e., the
fore-aft acceleration) and support (i.e., the
vertical acceleration) of the body mass center
during running.
Downloads last week: 52
Total followers: 37
Total downloads: 21,895

Transtibial (below-knee) amputee OpenSim model and Biarticular Prosthesis

This project has two main aims: 1) To develop
and validate a transtibial amputee model with
representative mass, inertial, and muscular
properties 2) To use this model to analyze
collected gait data from transtibial amputees
walking on a Biarticular Prosthesis prototype
Downloads last week: 105

Associating Biological Context with PPIs through Text Mining at PubMed Scale

We demonstrate an approach for enriching
text-derived knowledge bases with biological
detail by incorporating cell type context into
protein-protein interaction networks at PubMed
scale
Forum posts last week: 1

Whole-Cell Computational Model of Mycoplasma genitalium

This project provides all code and data for the
first "whole-cell" model of the entire life cycle
of a living organism, Mycoplasma
genitalium.
Downloads last week: 305
Total downloads: 126,225

Reproducibility in simulation­-based prediction of natural knee mechanics

This project aims for understanding the influence
of modelers’ approaches and decisions
(essentially their art) throughout the lifecycle
of modeling and simulation. It will demonstrate
the uncertainty of delivering consistent
simulation predictions when the founding data to
feed into models remain the same. The project site
also aims to be a hub to provide an overview of
resources for modeling & simulation of the knee
joint. Funding is provided by the National
Institute of Biomedical Imaging and
Bioengineering, National Institutes of Health
(Grant No. R01EB024573).
Downloads last week: 81
New members: 1
Total downloads: 15,776

Platform for Dynamic Simulation and Control of Movement based on OpenSim&MATLAB

This project overcomes neuromusculoskeletal
systems limitations of MATLAB®/Simulink® and
robust design & control limitations of OpenSim
through an interface between these two software
packages that combines relevant strengths of each
individual package.
Total followers: 67

Snorkel

Snorkel is an open-source system that generates
training data for information extraction systems,
also known as predictive systems.
Downloads last week: 104
Total downloads: 29,344

Framework for Predictive Simulation of Treadmill Gait

Developed and validated a predictive simulation
framework for treadmill gait using direct
collocation methods via OpenSim Moco.
New download files: 1

Multi-segment Foot and ankle model validated using biplanar videoradiography

A multi-segment foot and ankle model consisting of
the tibia, talus, calcaneus, midfoot, forefoot and
toes, with a total of 7 degrees of freedom. Motion
between segments were constrained such that all
joints except for the ankle were modelled as a
revolut
Downloads last week: 58

OpenSim Moco

OpenSim Moco solves optimal control problems with
musculoskeletal models defined in OpenSim, using
direct collocation.
Forum posts last week: 12
New followers: 1

Model of the Scapulothoracic Joint

Provide an OpenSim Joint model that enables a more
accurate representation of scapula mechanics in
musculoskeletal simulations.
Total followers: 28
Total downloads: 7,948

Upper Extremity Dynamic Model

Provides the files associated with a dynamic model
of the upper limb for use in SIMM or OpenSim.
Total followers: 39
Total downloads: 7,558

Matlab-Opensim Interfaces

Provides tools for using different aspects of
Opensim within the Matlab environment, including
command line pipelines as well as accessing the
Opensim API directly. The main functionality
has now been included as part of Opensim 3.0 with
improved functionality (and will become more
obsolete with Opensim 4.0). Please see the
developer wiki for more information. Therefore
this is being kept only as an archive, and users
should see the documentation on interfacing Matlab
with Opensim on the Opensim website
(http://simtk-confluence.stanford.edu:8080/display
/OpenSim/Scripting+with+Matlab). As such the
forums etc will not be monitored.
Total followers: 24
Total downloads: 8,040

Dynamic Arm Simulator

Provides a real-time, dynamic simulation of arm
movement.
Total followers: 30

2007BioE15 Bruns

Submit materials for class
Total followers: 71