Trending Projects
MITK-GEM: Software pipeline to GEnerate Models from images
Provides a image analysis application with GUI togenerate finite element models from medical
images.
Downloads last week: 47
Muscle-actuated Simulation of Human Running
The purpose of this study was to determine howmuscles contribute to propulsion (i.e., the
fore-aft acceleration) and support (i.e., the
vertical acceleration) of the body mass center
during running.
Downloads last week: 66
Total followers: 40
Total downloads: 24,921
Practical Annotation and Exchange of Virtual Anatomy
This site serves for dissemination of aeva and itsuse cases. aeva is a free and open source software
for annotation and exchange of virtual anatomy.
The use cases drive design and testing of aeva
features and demonstrate various workflows that
rely on virtual anatomy.
Downloads last week: 78
Full Body Model for use in Dynamic Simulations of Human Gait
Full body musculoskeletal model withmuscle-actuated lower extremity and
torque-actuated torso/upper extremity for use in
dynamic simulations of human movement.
Total followers: 35
Total downloads: 12,191
Seven things to know about exercise monitoring with inertial sensing wearables
We present open-source deep learning basedclassifiers for predicting physical therapy
exercises using inertial measurement units, and a
comprehensive analysis of impacts of sensor
density, location, type, state estimation, and
sample size on the performance.
Forum posts last week: 1
Upper limb model
I have to create an upper limb model to study thedynamics and kinematics correlated to muscle
activation for my master's thesis
Forum posts last week: 1
Statistical analysis of conformational ensembles
Provide user-friendly codes and algorithms writtenusing GROMACS/CHARMM APIs for statistical analysis
of conformational ensembles
Downloads last week: 62
AddBiomechanics
Upload marker trajectories and ground reactionforces and get an optimally scaled OpenSim model,
inverse kinematics, and inverse dynamics results
back in minutes. Share your data with the
community. Browse and download biomechanics data.
Hosted by Stanford University. Available at
https://addbiomechanics.org
Forum posts last week: 8
Open Knee(s): Virtual Biomechanical Representations of the Knee Joint
Open Knee(s) goals have been to provide freeaccess to three-dimensional finite element
representations of the knee joint and promote open
development of knee models for collaborative
testing and use. <B>Definitive Guide to
Project and Its Outcomes</B> Open Knee(s): A
Free and Open Source Library of Specimen-Specific
Models and Related Digital Assets for Finite
Element Analysis of the Knee Joint. Chokhandre S,
Schwartz A, Klonowski E, Landis B, Erdemir A. Ann
Biomed Eng. 2023 Jan;51(1):10-23. (<A
HREF="https://doi.org/10.1007/s10439-022-0307
4-0">https://doi.org/10.1007/s10439-022-03
074-0</A>) <B>Definitive Guide to
Open Knee(s) Data</B> Specimen specific
imaging and joint mechanical testing data for next
generation virtual knees. Chokhandre S, Neumann
EE, Nagle TF, Colbrunn RW, Flask CA, Colak C,
Halloran J, Erdemir A. Data Brief. 2021 Jan
30;35:106824. (<A
HREF="https://doi.org/10.1016/j.dib.2021.1068
24">https://doi.org/10.1016/j.dib.2021.106
824</A>) <B>Database of Open
Knee(s) Models</B> Under Downloads ->
Data Share -> View -> OKS_models and at
(<A
HREF="https://doi.org/10.18735/b0zv-n395"
;>https://doi.org/10.18735/b0zv-n395</A>)
<B>Database of Open Knee(s)
Data</B> Growing version under Downloads
-> Data Share -> View -> Open Knees Data;
permanent static version at (<A
HREF="https://doi.org/10.18735/4e78-1311"
;>https://doi.org/10.18735/4e78-1311</A>)
Downloads last week: 714
Total followers: 45
Total downloads: 133,069
OpenMM
OpenMM includes everything one needs to run modernmolecular simulations. It is extremely flexible
with its custom functions, is open-source, and has
high performance, especially on recent GPUs.
Downloads last week: 1,365
Forum posts last week: 2
Total followers: 66
Total downloads: 724,286
Model of the Scapulothoracic Joint
Provide an OpenSim Joint model that enables a moreaccurate representation of scapula mechanics in
musculoskeletal simulations.
Total followers: 30
Total downloads: 9,324
OpenMM Zephyr
OpenMM Zephyr provides a visual application forrunning GPU-accelerated molecular simulations.
Downloads last week: 332
Total downloads: 1,098,063
Patellofemoral joint model for knee pathologies analysis
The project presents a knee model, including a sixdegree-of-freedom patellofemoral joint, patellar
stabilizers and contact surfaces for patella and
femur.
Forum posts last week: 1
Thoracolumbar spine and rib cage model in OpenSim
The aim of this project is to provide detailed andwell-validated musculoskeletal models of the
thoracolumbar spine and rib cage, particularly for
investigators with an interest studying
musculoskeletal loading in the trunk.
Total followers: 39
Matlab-Opensim Interfaces
Provides tools for using different aspects ofOpensim within the Matlab environment, including
command line pipelines as well as accessing the
Opensim API directly. The main functionality
has now been included as part of Opensim 3.0 with
improved functionality (and will become more
obsolete with Opensim 4.0). Please see the
developer wiki for more information. Therefore
this is being kept only as an archive, and users
should see the documentation on interfacing Matlab
with Opensim on the Opensim website
(http://simtk-confluence.stanford.edu:8080/display
/OpenSim/Scripting+with+Matlab). As such the
forums etc will not be monitored.
Total followers: 26
Total downloads: 9,049
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Biological applications