The Musculoskeletal Atlas Project

Provides an easy-to-use application for visualising imaging data, segmenting images, creating geometric meshes, and exporting OpenSim and FE models.
Forum posts last week: 1

SimVascular: Examples and Clinical Cases

Download examples and clinical case files for cardiovascular modeling and simulation compatible with SimVascular
Downloads last week: 17
Total downloads: 1,494

SimTK Website

Provide updates about the SimTK website and support its users
Forum posts last week: 3

Matlab-Opensim Interfaces

Provides tools for using different aspects of Opensim within the Matlab environment, including command line pipelines as well as accessing the Opensim API directly. The main functionality has now been included as part of Opensim 3.0 with improved functionality (and will become more obsolete with Opensim 4.0). Please see the developer wiki for more information. Therefore this is being kept only as an archive, and users should see the documentation on interfacing Matlab with Opensim on the Opensim website (http://simtk-confluence.stanford.edu:8080/display/OpenSim/Scripting+with+Matlab). As such the forums etc will not be monitored.
Downloads last week: 18
Forum posts last week: 1
Total downloads: 4,158

Model of the Scapulothoracic Joint

Provide an OpenSim Joint model that enables a more accurate representation of scapula mechanics in musculoskeletal simulations.
Downloads last week: 22
Total downloads: 2,133

Grand Challenge Competition to Predict In Vivo Knee Loads

Provide a comprehensive data set with associated models that will enable researchers to validate musculoskeletal model estimates of muscle and joint contact forces in the knee.
Downloads last week: 22
Total downloads: 11,373

Snorkel

Snorkel is an open-source system that generates training data for information extraction systems, also known as predictive systems.
Downloads last week: 37
Total downloads: 2,715

DeepCell: Deep convolutional neural networks for image segmentation

Provide source code for deep learning based image segmentation
Downloads last week: 19
Total downloads: 2,261

Muscle-actuated Simulation of Human Running

The purpose of this study was to determine how muscles contribute to propulsion (i.e., the fore-aft acceleration) and support (i.e., the vertical acceleration) of the body mass center during running.
Downloads last week: 21
Total followers: 25
Total downloads: 11,085

Calibrated EMG-Informed Neuromusculoskeletal Modelling Toolbox (CEINMS)

Provides an easy to use toolbox, compatible with OpenSim, for the estimation of the human lower extremity muscle and joint dynamics.
Total followers: 28
Total downloads: 1,534

A Comprehensive Assessment of Shoulder Motion

Comprehensive set of synchronized EMG and motion capture data of 20 muscle segments of the shoulder from five normally developed subjects performing five commonplace shoulder motions.
Forum posts last week: 1
New download files: 5
New members: 4

2007BioE15 Bruns

Submit materials for class
Total followers: 34

Convert .c3d and .csv files to OpenSim files without any program but MatLab

Convert experimental biomechanical data into OpenSim input files without the need of any other software but MatLab©. Persons with little or no knowledge of computation programing can use this routine to
Downloads last week: 19
Total downloads: 1,740

OpenMM

OpenMM includes everything one needs to run modern molecular simulations. It is extremely flexible with its custom functions, is open-source, and has high performance, especially on recent GPUs.
Downloads last week: 592
Forum posts last week: 6
Total followers: 48
Total downloads: 124,331

SimVascular: Cardiovascular Modeling and Simulation

Provides a platform for patient-specific cardiovascular modeling and simulation.
Downloads last week: 48
Forum posts last week: 6
Total followers: 50
Total downloads: 9,681