Enabling groundbreaking biomedical research via open access to high-quality simulation tools, accurate models, and the people behind them.

1073 projects
655600 downloads
73147 members
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Trending Projects

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2007BioE15 Bruns

Submit materials for class
Total followers: 35
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Full Body Model for use in Dynamic Simulations of Human Gait

Full body musculoskeletal model with muscle-actuated lower extremity and torque-actuated torso/upper extremity for use in dynamic simulations of human movement.
Downloads last week: 17
New followers: 1
Total downloads: 2,080
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Whole-Cell Computational Model of Mycoplasma genitalium

This project provides all code and data for the first "whole-cell" model of the entire life cycle of a living organism, Mycoplasma genitalium.
Downloads last week: 36
Total downloads: 19,052
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BioGears: An open source mathematical model of the human physiology.

Provide a whole body physiology model that can run in real-time and provide accurate physiologic outputs that can be used for clinical training, teaching, research, and product integration.
New followers: 1
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SimVascular: Cardiovascular Modeling and Simulation

Provides a platform for patient-specific cardiovascular modeling and simulation.
Downloads last week: 41
Forum posts last week: 9
Total followers: 51
New followers: 1
Total downloads: 10,043
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Computational Methods in Cardiovascular Bioengineering Course (BioE484)

To showcase the student research projects developed as part of this course.
New followers: 1
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Model of the Scapulothoracic Joint

Provide an OpenSim Joint model that enables a more accurate representation of scapula mechanics in musculoskeletal simulations.
Downloads last week: 26
Total downloads: 2,200
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SimVascular: Third-party open source software.

Third party open source software needed by the new SimVascular project.
New followers: 1
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Platform for Dynamic Simulation and Control of Movement based on OpenSim&MATLAB

This project overcomes neuromusculoskeletal systems limitations of MATLAB®/Simulink® and robust design & control limitations of OpenSim through an interface between these two software packages that combines relevant strengths of each individual package.
Total followers: 23
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Snorkel

Snorkel is an open-source system that generates training data for information extraction systems, also known as predictive systems.
Downloads last week: 45
Total downloads: 3,024
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Infarcted human left ventricular myofiber stress

Define regional human left ventricular myofiber mechanical properties and stress in order to realistically simulate various treatment options
New followers: 1
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Biosimulation Education and Training

Repository of educational, training, and teaching materials for physics-based simulation of biological structures. See the documents section for course material.
New followers: 1
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3D Numerical Investigation of Endothelial Shear Stress in Arteries

The goal of this project is to evaluate the versatility of SimVascular in comparison with previous simulations perform with ANSYS to predict the association of Endothelial shear stress to plaque thickness in coronary arteries.
New followers: 1
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OpenSim

Provide easy-to-use, extensible software for modeling, simulating, controlling, and analyzing the neuromusculoskeletal system.
Downloads last week: 1,012
Forum posts last week: 70
Total followers: 180
Total downloads: 234,048
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Calibrated EMG-Informed Neuromusculoskeletal Modelling Toolbox (CEINMS)

Provides an easy to use toolbox, compatible with OpenSim, for the estimation of the human lower extremity muscle and joint dynamics.
Total followers: 28
Total downloads: 1,601

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Jobs

Open MASc/PhD Position: Early Detection of Coronary Artery Bypass Graft Failure using Medical Imaging and Computational Fluid Dynamics

University of Toronto May 17, 2018
The research group of Prof. Piero Triverio at the University of Toronto is seeking a graduate student for a research project in computational fluid dynamics applied to coronary artery disease.

PhD student positions in Wearable Robotics

University of Twente May 11, 2018
The Department of Biomechanical Engineering at the University of Twente invites applications for PhD student positions in the field of Wearable Robotics.

Post-doc position

McGill University May 7, 2018
The Voice Research Laboratory at McGill University (Canada) has a 3-year post-doc position in agent-based modeling of biomaterial designs for laryngeal reconstruction.

Postdoctoral Fellow opening

Hospital for Special Surgery May 2, 2018
Immediate opening for a post-doc in the Biomechanics Department

See all job openings...

News

Webinar on robust control strategies for musculoskeletal models using deep reinforcement learning

OpenSim Jul 24, 2018
Image not availableWe invite you to join us for a webinar featuring Łukasz Kidziński from Stanford University giving an introduction to reinforcement learning and its application to developing control strategies.

SimVascular Workshop at WCB Dublin

SimVascular: Cardiovascular Modeling and Simulation May 7, 2018
Image not availableIf you are attending the WCB Dublin 2018, please come to our SimVascular workshop Sunday July 8.

Iliotibial Band Models Uploaded

Muscle-Joint Contact Force Model Oct 14, 2017
Image not availablePreliminary models of Iliotibial Band and Lateral Femoral Epicondyle contact force have been uploaded!

Share Your Models for Teaching Via New Community Group

SimTK Website Oct 11, 2017
Image not availableThe newest community on SimTK is the IMAG-MSM Public Dissemination & Education Working Group (https://simtk.org/category/communityPage.php?cat=1005&sort=date&page=0&srch=&).

Webinar on why antagonists are activated in hip and knee flexion simulations

OpenSim Sep 23, 2017
Image not availableWe invite you to join us for a webinar featuring Adrian Lai from Simon Fraser University and Allison Arnold from Harvard University to learn practical tips for simulating and analyzing tasks with large hip and knee flexion.

SimTK is maintained through Grant R01GM124443 01A1 from the National Institutes of Health (NIH). It was initially developed as part of the Simbios project funded by the NIH as part of the NIH Roadmap for Medical Research, Grant U54 GM072970.

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