Simbios Dissemination

Main repository for Simbios dissemination-related
tasks and materials
Downloads last week: 30

2007BioE15 Bruns

Submit materials for class
Total followers: 50

Thoracolumbar spine and rib cage model in OpenSim

The aim of this project is to provide detailed and
well-validated musculoskeletal models of the
thoracolumbar spine and rib cage, particularly for
investigators with an interest studying
musculoskeletal loading in the trunk.
Total followers: 26
New followers: 2

OpenSim

Provide easy-to-use, extensible software for
modeling, simulating, controlling, and analyzing
the neuromusculoskeletal system.
Downloads last week: 1,011
Forum posts last week: 35
Total followers: 250
New followers: 1
Total downloads: 380,064

London Lumbar Spine Model

The aim of this project is to provide a reliable
model of the lumbar spine and lower limbs to
estimate muscle and joint reaction forces for
daily living activities including locomotion and
lifting tasks.
New download files: 1

Automatic Generation of Personalised Skeletal Models of the Lower Limb

The aim of this project is to automatically
generate skeletal OpenSim models using
three-dimensional bone geometries obtained from
medical images using the href="https://simtk.org/projects/msk-staple">STAPL
E toolbox. The automatically created models
are compared against models manually created from
the same anatomical datasets.
New members: 2

Muscle-actuated Simulation of Human Running

The purpose of this study was to determine how
muscles contribute to propulsion (i.e., the
fore-aft acceleration) and support (i.e., the
vertical acceleration) of the body mass center
during running.
Downloads last week: 27
Total followers: 35
Total downloads: 17,555

OpenArm: Volumetric & Time Series Models of Muscle Deformation

The OpenArm data sets are designed to enable study
of force- and kinematic-induced muscle deformation
for applications in biomechanics research,
computer graphics, and assistive device
development. **NEW:** The OpenArm Multisensor
1.0 data set contains time series cross-sectional
ultrasound scans of the brachioradialis muscle
under variable elbow loading, alongside
corresponding surface electromyography (sEMG),
acoustic myography (AMG), and force data. The
OpenArm 1.0 and 2.0 data sets encompass factorial
sets of volumetric scans of the arm, generated
using ultrasound and motion capture, that allow
for analysis of both force- and
configuration-associated muscle deformation.
New followers: 1

Bone deformation tool for OpenSim models

This repository is used for sharing a MATLAB
toolbox that enables researcher in musculoskeletal
models to modify generic musculoskeletal models by
applying arbitrary torsion profiles to the long
axis of the bone model. Please note that the
bone-deformation toolbox currently works for
OpenSim v3.3.
New download files: 2
New followers: 2

SimVascular: Cardiovascular Modeling and Simulation

Provides a platform for patient-specific
cardiovascular modeling and simulation.
Downloads last week: 88
Forum posts last week: 23
Total followers: 71
Total downloads: 20,801

Grand Challenge Competition to Predict In Vivo Knee Loads

Provide a comprehensive data set with associated
models that will enable researchers to validate
musculoskeletal model estimates of muscle and
joint contact forces in the knee.
Downloads last week: 27
Total downloads: 18,575

STAPLE: Shared Tools for Automatic Personalised Lower Extremity modelling

STAPLE, acronym for Shared Tools for
Automatic Personalised Lower Extremity
modelling, is a MATLAB toolbox that enables
researchers in the biomechanical field to create
models of the lower extremity from
subject-specific bone geometries with minimum
effort in negligible processing time. In most
cases, that can be done just changing the input
data in one of the provided workflow and running a
MATLAB script. Please note that the toolbox is
still released as beta version. If you encounter
any issue please report it href="https://github.com/modenaxe/msk-STAPLE/issue
s">at this link. At this page we will
release the stable versions of STAPLE. You can
follow, participate and contribute to the open
development of the toolbox at href="https://github.com/modenaxe/msk-STAPLE">http
s://github.com/modenaxe/msk-STAPLE.
New followers: 1
New members: 1

Platform for Dynamic Simulation and Control of Movement based on OpenSim&MATLAB

This project overcomes neuromusculoskeletal
systems limitations of MATLAB®/Simulink® and
robust design & control limitations of OpenSim
through an interface between these two software
packages that combines relevant strengths of each
individual package.
Total followers: 51

OpenMM

OpenMM includes everything one needs to run modern
molecular simulations. It is extremely flexible
with its custom functions, is open-source, and has
high performance, especially on recent GPUs.
Downloads last week: 1,404
Forum posts last week: 9
Total followers: 61
Total downloads: 372,397

Lifting Full-Body Model

The existing full-body-lumbar-spine (FBLS) model
was adapted and validated for lifting motions to
produce the lifting full-body (LFB) model to
estimate spinal loads during lifting. The model
was validated through comparisons with
experimental electromyogr
New followers: 1