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918363 downloads
86528 members
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Trending Projects

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Snorkel

Snorkel is an open-source system that generates
training data for information extraction systems,
also known as predictive systems.
Downloads last week: 112
Total downloads: 9,743
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Simulations of Crouch Gait

Simulations of individuals with cerebral palsy
who walk in a crouch gait . These simulations
were used in analyses of (1) contributions to mass
center accelerations, (2) impacts of muscle
weakness, (3) magnitudes of tibiofemoral contact
forces, and (4) evaluations of ankle foot orthoses
during crouch gait. Downloads provide all
supporting files for OpenSim simulations. Please
see accompanying publications for more
information.
Downloads last week: 30
Total downloads: 4,851
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Simbody: Multibody Physics API

Simbody is useful for internal coordinate and
coarse grained molecule modeling, large scale
mechanical models like skeletons, and anything
else that can be modeled as bodies interconnected
by joints, acted upon by forces, and restricted by
constraints.
Forum posts last week: 1
Total downloads: 4,584
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Full Body Model for use in Dynamic Simulations of Human Gait

Full body musculoskeletal model with
muscle-actuated lower extremity and
torque-actuated torso/upper extremity for use in
dynamic simulations of human movement.
Downloads last week: 52
Total followers: 22
Total downloads: 3,822
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OpenMM

OpenMM includes everything one needs to run modern
molecular simulations. It is extremely flexible
with its custom functions, is open-source, and has
high performance, especially on recent GPUs.
Downloads last week: 2,432
Forum posts last week: 16
Total followers: 55
Total downloads: 221,715
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OpenSim

Provide easy-to-use, extensible software for
modeling, simulating, controlling, and analyzing
the neuromusculoskeletal system.
Downloads last week: 933
Forum posts last week: 76
Total followers: 222
New followers: 1
Total downloads: 298,568
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Wrist Anatomy and Kinematics Data Collection

The current collection includes carpal bone (not
metacarpals) anatomy models from 90 healthy
subjects (120 wrists), and the carpal bone
kinematics in 1215 unique wrist positions. A
graphical user interface (GUI) is also developed
to maximize user interaction with this collection.
Forum posts last week: 1
New download files: 1
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Calibrated EMG-Informed Neuromusculoskeletal Modelling Toolbox (CEINMS)

Provides an easy to use toolbox, compatible with
OpenSim, for the estimation of the human lower
extremity muscle and joint dynamics.
Downloads last week: 39
Total followers: 32
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OpenSim Moco

OpenSim Moco solves optimal control problems with
musculoskeletal models defined in OpenSim, using
direct collocation.
Downloads last week: 26
Forum posts last week: 18
New followers: 1
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Dynamic Arm Simulator

Provides a real-time, dynamic simulation of arm
movement.
Total followers: 25
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Muscle-actuated Simulation of Human Running

The purpose of this study was to determine how
muscles contribute to propulsion (i.e., the
fore-aft acceleration) and support (i.e., the
vertical acceleration) of the body mass center
during running.
Downloads last week: 153
Total followers: 31
Total downloads: 14,279
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SCONE: Open Source Software for Predictive Simulation of Biological Motion

SCONE is open source software for predictive
simulation of biological motion. It optimizes
muscle excitation patterns and motion trajectories
according to high-level objectives, such as
walking speed and energy efficiency. Visit the
SCONE
homepage for more information.
Forum posts last week: 6
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FragFEATURE: Knowledge-based Fragment Binding Prediction

Provide a knowledge-based fragment binding
predictor as well as the underlying knowledge
base.
New members: 1
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OpenSim Soccer Ball Kicking Example

Provides an installer for producing forward
dynamics simulations of a soccer ball kick.
Downloads last week: 40
Total downloads: 4,430
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Open Knee(s): Virtual Biomechanical Representations of the Knee Joint

Overall purposes of the project are: 1) To
provide free access to three-dimensional finite
element representations of the knee joint 2)
Open development of knee models for collaborative
testing and use
Downloads last week: 425
Total followers: 34
Total downloads: 33,246

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Biological applications
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Jobs

Postdoc opening: neuro-mechanical modelling for robotic exosuits in factory settings

University of Twente
Novemebr 15, 2019
The Neuro-Mechanical Modeling and Engineering Lab at the University of Twente is seeking for an outstanding post-doctoral fellow to work within the newly funded EU project SOPHIA.

Biomechanics and Mathematical Modeling Research Scientist Positions

Henry M. Jackson Foundation for the Advancement of Military Medicine
November 15, 2019
HJF has multiple openings for biomechanics and mathematical modeling researchers. International candidates are encouraged to apply.

C++ Software Developer: Computational Modeling and Simulation

Kitware
October 9, 2019
Kitware is developing open source computational tools and applications for modeling and simulation of open and minimally invasive surgical procedures during cardiovascular interventions, neurosurgery, nasal surgery, orthognathic surgery and orthopedic surgery. If hired, the R&D engineer will be working on open source computational simulation toolkits that Kitware maintains including iMSTK, Pulse, CMB and VTK and developing applications using these toolkits.

See all job openings...

News

First release of OpenSim Moco

OpenSim Moco Nov 13, 2019
Image not availableA beta version of OpenSim Moco has been released, following the posting of a preprint of OpenSim Moco on bioRxiv.

OpenSim Webinar - OpenSim Moco: Software to optimize the motion and control of OpenSim models

OpenSim Nov 4, 2019
Image not availableWe invite you to join us for a webinar featuring Christopher Dembia & Nick Bianco from Stanford University.

Webinar: Predictive Simulation of Biological Motion using SCONE

OpenSim Oct 21, 2019
Image not availableWe invite you to join us for a webinar featuring Thomas Geijtenbeek from Delft University of Technology.

OpenArm 2.0 data set released + scheduled for presentation at EMBC Berlin!

OpenArm: Volumetric Models of Force- and Kinematic-Induced Muscle Deformation Jul 16, 2019
Image not availableThe OpenArm 2.0 muscle deformation data set has now been released to SimTK, and is scheduled for presentation at EMBC 2019 in Berlin!

SimVascular Workshop and Booth at SB3C 2019

SimVascular: Cardiovascular Modeling and Simulation Jun 21, 2019
Image not availableJoin us for a SimVascular workshop and new user training at the SB3C meeting June 25th 11:30am.

SimTK is maintained through Grant R01GM124443 01A1 from the National Institutes of Health (NIH). It was initially developed as part of the Simbios project funded by the NIH as part of the NIH Roadmap for Medical Research, Grant U54 GM072970.

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