Trending Projects
OpenArm: Volumetric & Time Series Models of Muscle Deformation
The OpenArm data sets are designed to enable studyof force- and kinematic-induced muscle deformation
for applications in biomechanics research,
computer graphics, and assistive device
development. **NEW:** The OpenArm Multisensor
2.0 data set contains new time series of
ultrasound-measured brachioradialis deformation,
surface electromyography (sEMG)-measured
activation, force, and goal trajectory data, for
various force-, deformation-, and activation-based
trajectory tracking tasks, under refined
conditions from those of the 1.0 data set. Also
included are all analysis, real-time muscle
deformation tracking, and display code. The
OpenArm Multisensor 1.0 data set contains time
series cross-sectional ultrasound scans of the
brachioradialis muscle under variable elbow
loading, alongside corresponding surface
electromyography (sEMG), acoustic myography (AMG),
and force data. The OpenArm 1.0 and 2.0 data
sets encompass factorial sets of volumetric scans
of the arm, generated using ultrasound and motion
capture, that allow for analysis of both force-
and configuration-associated muscle deformation.
Downloads last week: 71
Snorkel
Snorkel is an open-source system that generatestraining data for information extraction systems,
also known as predictive systems.
Downloads last week: 72
Total downloads: 29,358
Multi-segment Foot and ankle model validated using biplanar videoradiography
A multi-segment foot and ankle model consisting ofthe tibia, talus, calcaneus, midfoot, forefoot and
toes, with a total of 7 degrees of freedom. Motion
between segments were constrained such that all
joints except for the ankle were modelled as a
revolut
Downloads last week: 81
Thoracolumbar spine and rib cage model in OpenSim
The aim of this project is to provide detailed andwell-validated musculoskeletal models of the
thoracolumbar spine and rib cage, particularly for
investigators with an interest studying
musculoskeletal loading in the trunk.
Total followers: 34
SimVascular: Examples and Clinical Cases
Download examples and clinical case files forcardiovascular modeling and simulation compatible
with SimVascular
Downloads last week: 49
Total downloads: 9,690
Full Body Model for use in Dynamic Simulations of Human Gait
Full body musculoskeletal model withmuscle-actuated lower extremity and
torque-actuated torso/upper extremity for use in
dynamic simulations of human movement.
Total followers: 32
Total downloads: 9,501
Whole-Cell Computational Model of Mycoplasma genitalium
This project provides all code and data for thefirst "whole-cell" model of the entire life cycle
of a living organism, Mycoplasma
genitalium.
Downloads last week: 281
Total downloads: 126,313
Muscle constitutive model with a tangent modulus approximation
Ansys implementation of a muscle constitutivemodel that uses an approximation of the tangent
modulus.
New download files: 1
Transtibial (below-knee) amputee OpenSim model and Biarticular Prosthesis
This project has two main aims: 1) To developand validate a transtibial amputee model with
representative mass, inertial, and muscular
properties 2) To use this model to analyze
collected gait data from transtibial amputees
walking on a Biarticular Prosthesis prototype
Downloads last week: 105
OpenSim
Provide easy-to-use, extensible software formodeling, simulating, controlling, and analyzing
the neuromusculoskeletal system.
Downloads last week: 1,279
Forum posts last week: 35
Total followers: 294
Total downloads: 632,398
Reproducibility in simulationÂ-based prediction of natural knee mechanics
This project aims for understanding the influenceof modelers’ approaches and decisions
(essentially their art) throughout the lifecycle
of modeling and simulation. It will demonstrate
the uncertainty of delivering consistent
simulation predictions when the founding data to
feed into models remain the same. The project site
also aims to be a hub to provide an overview of
resources for modeling & simulation of the knee
joint. Funding is provided by the National
Institute of Biomedical Imaging and
Bioengineering, National Institutes of Health
(Grant No. R01EB024573).
Downloads last week: 79
Total downloads: 15,779
Associating Biological Context with PPIs through Text Mining at PubMed Scale
We demonstrate an approach for enrichingtext-derived knowledge bases with biological
detail by incorporating cell type context into
protein-protein interaction networks at PubMed
scale
Forum posts last week: 1
3D Models of the Visible Human Male and Female
Complete 3D musculoskeletal geometries wereextracted from the National Libraries of Medicine
Visible Human Female and Male cryosection images.
Muscle, bone, cartilage, ligament, and fat from
the pelvis to the ankle were digitized and
exported in shareabl
New download files: 2
Matlab-Opensim Interfaces
Provides tools for using different aspects ofOpensim within the Matlab environment, including
command line pipelines as well as accessing the
Opensim API directly. The main functionality
has now been included as part of Opensim 3.0 with
improved functionality (and will become more
obsolete with Opensim 4.0). Please see the
developer wiki for more information. Therefore
this is being kept only as an archive, and users
should see the documentation on interfacing Matlab
with Opensim on the Opensim website
(http://simtk-confluence.stanford.edu:8080/display
/OpenSim/Scripting+with+Matlab). As such the
forums etc will not be monitored.
Total followers: 24
Total downloads: 8,040
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Jobs
NIH-funded Post-doctoral Position
Rice Computational Neuromechanics Lab
Sep 13, 2022
Sep 13, 2022
The Rice Computational Neuromechanics Lab directed by B.J. Fregly is seeking to hire a creative and highly-motivated post-doctoral research associate, with an appointment beginning as soon as possible. We are seeking candidates who have demonstrated ability to lead and/or work collaboratively in teams composed of individuals of diverse backgrounds, skills, and perspectives.
Postdoctoral Scholar - Human Performance Alliance Innovation Hub
University of Oregon
Aug 19, 2022
Aug 19, 2022
A postdoctoral research position is available at the Bowerman Sports Science Center within the new Hayward Field athletics facility at the University of Oregon, Eugene, OR. This position will join a vibrant team of research staff, graduate students, postdoctoral researchers and faculty in applied physiology and biomechanics, all working in association with the Wu Tsai Human Performance Alliance Innovation Hub at the University of Oregon. Additionally, the position will involve frequent collaboration with Bioengineering faculty and research staff in the Phil and Penny Knight Campus for Accelerating Scientific Impact.
News
SimVascular Workshop at SB3C 2022 June 23rd
SimVascular: Cardiovascular Modeling and Simulation
May 26, 2022