Trending Projects
A musculoskeletal model for simulations that involve high hip and knee flexion
The goal of this project was to developed arefined musculoskeletal model capable of
simulating movements that involve substantial hip
and knee flexion (e.g. sprinting and cycling). The
model is based on the model published by Rajagopal
et al., (2016). Please cite the following
paper, "Lai, A.K.M, Arnold, A.S., Wakeling, J.M.
(2017) Why are antagonist muscles co-activated in
my simulation? A musculoskeletal model for
analysing human locomotor task. Annals of
Biomedical Engineering.
Downloads last week: 68
Matlab-Opensim Interfaces
Provides tools for using different aspects ofOpensim within the Matlab environment, including
command line pipelines as well as accessing the
Opensim API directly. The main functionality
has now been included as part of Opensim 3.0 with
improved functionality (and will become more
obsolete with Opensim 4.0). Please see the
developer wiki for more information. Therefore
this is being kept only as an archive, and users
should see the documentation on interfacing Matlab
with Opensim on the Opensim website
(http://simtk-confluence.stanford.edu:8080/display
/OpenSim/Scripting+with+Matlab). As such the
forums etc will not be monitored.
Total followers: 25
Total downloads: 8,741
Full Body Model for use in Dynamic Simulations of Human Gait
Full body musculoskeletal model withmuscle-actuated lower extremity and
torque-actuated torso/upper extremity for use in
dynamic simulations of human movement.
Downloads last week: 37
Total followers: 34
Total downloads: 11,400
Open Knee(s): Virtual Biomechanical Representations of the Knee Joint
Open Knee(s) goals have been to provide freeaccess to three-dimensional finite element
representations of the knee joint and promote open
development of knee models for collaborative
testing and use. <B>Definitive Guide to
Project and Its Outcomes</B> Open Knee(s): A
Free and Open Source Library of Specimen-Specific
Models and Related Digital Assets for Finite
Element Analysis of the Knee Joint. Chokhandre S,
Schwartz A, Klonowski E, Landis B, Erdemir A. Ann
Biomed Eng. 2023 Jan;51(1):10-23. (<A
HREF="https://doi.org/10.1007/s10439-022-0307
4-0">https://doi.org/10.1007/s10439-022-03
074-0</A>) <B>Definitive Guide to
Open Knee(s) Data</B> Specimen specific
imaging and joint mechanical testing data for next
generation virtual knees. Chokhandre S, Neumann
EE, Nagle TF, Colbrunn RW, Flask CA, Colak C,
Halloran J, Erdemir A. Data Brief. 2021 Jan
30;35:106824. (<A
HREF="https://doi.org/10.1016/j.dib.2021.1068
24">https://doi.org/10.1016/j.dib.2021.106
824</A>) <B>Database of Open
Knee(s) Models</B> Under Downloads ->
Data Share -> View -> OKS_models and at
(<A
HREF="https://doi.org/10.18735/b0zv-n395"
;>https://doi.org/10.18735/b0zv-n395</A>)
<B>Database of Open Knee(s)
Data</B> Growing version under Downloads
-> Data Share -> View -> Open Knees Data;
permanent static version at (<A
HREF="https://doi.org/10.18735/4e78-1311"
;>https://doi.org/10.18735/4e78-1311</A>)
Downloads last week: 430
Total followers: 44
Total downloads: 123,553
OpenSim
Provide easy-to-use, extensible software formodeling, simulating, controlling, and analyzing
the neuromusculoskeletal system.
Downloads last week: 1,586
Forum posts last week: 21
New download files: 2
Total followers: 307
Total downloads: 705,450
Snorkel
Snorkel is an open-source system that generatestraining data for information extraction systems,
also known as predictive systems.
Downloads last week: 155
Total downloads: 35,753
OpenMM Zephyr
OpenMM Zephyr provides a visual application forrunning GPU-accelerated molecular simulations.
Downloads last week: 270,598
Total downloads: 724,630
Are subject-specific musculoskeletal models robust to parameter identification?
Analyze how robust are image-based musculoskeletalmodels to the uncertainties in parameter
identification, and provide software for
subject-specific model creation (NMSBuilder) and
probabilistic simulations of movement.
Downloads last week: 62
SimVascular: Cardiovascular Modeling and Simulation
Provides a platform for patient-specificcardiovascular modeling and simulation.
Downloads last week: 224
Forum posts last week: 19
Total followers: 77
Total downloads: 40,207
Whole-Cell Computational Model of Mycoplasma genitalium
This project provides all code and data for thefirst "whole-cell" model of the entire life cycle
of a living organism, Mycoplasma
genitalium.
Downloads last week: 321
Total downloads: 169,604
OpenCap
OpenCap is a software package to estimate 3D humanmovement dynamics from smartphone videos.
Forum posts last week: 35
OpenMM
OpenMM includes everything one needs to run modernmolecular simulations. It is extremely flexible
with its custom functions, is open-source, and has
high performance, especially on recent GPUs.
Downloads last week: 1,807
Forum posts last week: 2
Total followers: 66
Total downloads: 686,112
Model of the Scapulothoracic Joint
Provide an OpenSim Joint model that enables a moreaccurate representation of scapula mechanics in
musculoskeletal simulations.
Total followers: 30
Total downloads: 8,880
Heart Valve Replacement
Understand the blood flow through the aortic valvein order to better design mechanical heart valve
replacements.
Forum posts last week: 1
By Category
Biological applications