Z-anatomy: an open 3D atlas of human anatomy

This project began in february 2021 and is shared
on this
page: https://www.z-anatomy.com/ Blender, the
open source 3D modelling software is used to
navigate through the hundreds of .obj 3D files of
anatomical structures produced ten years ago by
'Bod
New followers: 1

Open Knee(s): Virtual Biomechanical Representations of the Knee Joint

Open Knee(s) goals have been to provide free
access to three-dimensional finite element
representations of the knee joint and promote open
development of knee models for collaborative
testing and use. <B>Definitive Guide to
Project and Its Outcomes</B> Open Knee(s): A
Free and Open Source Library of Specimen-Specific
Models and Related Digital Assets for Finite
Element Analysis of the Knee Joint. Chokhandre S,
Schwartz A, Klonowski E, Landis B, Erdemir A. Ann
Biomed Eng. 2023 Jan;51(1):10-23. (<A
HREF="https://doi.org/10.1007/s10439-022-0307
4-0">https://doi.org/10.1007/s10439-022-03
074-0</A>) <B>Definitive Guide to
Open Knee(s) Data</B> Specimen specific
imaging and joint mechanical testing data for next
generation virtual knees. Chokhandre S, Neumann
EE, Nagle TF, Colbrunn RW, Flask CA, Colak C,
Halloran J, Erdemir A. Data Brief. 2021 Jan
30;35:106824. (<A
HREF="https://doi.org/10.1016/j.dib.2021.1068
24">https://doi.org/10.1016/j.dib.2021.106
824</A>) <B>Database of Open
Knee(s) Models</B> Under Downloads ->
Data Share -> View -> OKS_models and at
(<A
HREF="https://doi.org/10.18735/b0zv-n395"
;>https://doi.org/10.18735/b0zv-n395</A>)
<B>Database of Open Knee(s)
Data</B> Growing version under Downloads
-> Data Share -> View -> Open Knees Data;
permanent static version at (<A
HREF="https://doi.org/10.18735/4e78-1311"
;>https://doi.org/10.18735/4e78-1311</A>)
Downloads last week: 424
Total followers: 44
Total downloads: 123,547

Tibiofemoral forces for medial and lateral compartment in knee osteoarthritis

The papers related to this project are currently
in the submission process. After publication, the
access link will be available on this webpage. The
model used for all studies involved in this
project is available for download.
New followers: 1

OpenMM

OpenMM includes everything one needs to run modern
molecular simulations. It is extremely flexible
with its custom functions, is open-source, and has
high performance, especially on recent GPUs.
Downloads last week: 1,769
Forum posts last week: 2
Total followers: 66
Total downloads: 686,074

SCONE: Open Source Software for Predictive Simulation

<img
src="https://scone.software/scone_window.png&
quot; alt="SCONE">SCONE is free and
open-source software for <b>predictive
simulation</b> of human and animal
motion. With SCONE, you can define and optimize
<b>neuromuscular controllers</b> to
optimally perform a specific task, according to
<b>high-level objectives</b> such as
walking speed and energy efficiency. Please
visit the <a
href="https://scone.software">SCONE
homepage</a> for more information, or check
<a
href="https://scone.software/doku.php?id=chan
ges">what's new</a> in the latest
version.
Forum posts last week: 4
Total followers: 33

Model to Investigate Hip Mechanics in Response to Dynamic Multiplanar Tasks

The purposes of this study were to: i) modify the
existing 2396Hip MSK model to simulate dynamic
tasks with multiplanar hip joint motion; and ii)
validate the modified MSK model quantitatively
against experimental data.
Forum posts last week: 1

Snorkel

Snorkel is an open-source system that generates
training data for information extraction systems,
also known as predictive systems.
Downloads last week: 152
Total downloads: 35,750

Heart Valve Replacement

Understand the blood flow through the aortic valve
in order to better design mechanical heart valve
replacements.
Forum posts last week: 1

OpenSim Moco

OpenSim Moco solves optimal control problems with
musculoskeletal models defined in OpenSim, using
direct collocation.
Forum posts last week: 25
New followers: 1

Finite Element Mesh Overclosure Reduction and Slicing (FEMORS)

This code contains functions to slice and remove
overclosures of 2D and 3D meshes using RBF
Networks, as well as conventional nodal
adjustment. It also contains helper functions,
that can slice and load STL geometries and
manipulate and view 3D hexahedral meshes.
New download files: 1

Batch OpenSim Processing Scripts (BOPS)

Provide a MATLAB based, user friendly and
easy-to-use tool to perform batch process of the
most commonly used OpenSim Tools (IK, ID, MA, SO
and JRA).
Forum posts last week: 1

Are subject-specific musculoskeletal models robust to parameter identification?

Analyze how robust are image-based musculoskeletal
models to the uncertainties in parameter
identification, and provide software for
subject-specific model creation (NMSBuilder) and
probabilistic simulations of movement.
Downloads last week: 59

OpenCap

OpenCap is a software package to estimate 3D human
movement dynamics from smartphone videos.
Forum posts last week: 35
New followers: 1

SimVascular: Cardiovascular Modeling and Simulation

Provides a platform for patient-specific
cardiovascular modeling and simulation.
Downloads last week: 203
Forum posts last week: 20
Total followers: 77
Total downloads: 40,186

OpenSim

Provide easy-to-use, extensible software for
modeling, simulating, controlling, and analyzing
the neuromusculoskeletal system.
Downloads last week: 1,489
Forum posts last week: 22
New download files: 2
Total followers: 307
New followers: 1
Total downloads: 705,353