Enabling groundbreaking biomedical research via open access to high-quality simulation tools, accurate models, and the people behind them.

1092 projects
679999 downloads
74982 members
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Trending Projects

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Grand Challenge Competition to Predict In Vivo Knee Loads

Provide a comprehensive data set with associated
models that will enable researchers to validate
musculoskeletal model estimates of muscle and
joint contact forces in the knee.
Downloads last week: 84
Forum posts last week: 1
Total downloads: 11,958
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Climber: a non-linear protein trajectory morphing method

Provide high-fidelity morphed protein trajectories
between two known protein conformations.
Downloads last week: 51
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My Walk

Analyse my walk from 17.09.2018
Forum posts last week: 1
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2007BioE15 Bruns

Submit materials for class
Total followers: 37
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The Musculoskeletal Atlas Project

Provides an easy-to-use application for
visualising imaging data, segmenting images,
creating geometric meshes, and exporting OpenSim
and FE models.
Forum posts last week: 2
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Upper Extremity Dynamic Model

Provides the files associated with a dynamic model
of the upper limb for use in SIMM or OpenSim.
Downloads last week: 22
Total downloads: 3,038
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Lower Limb Model 2010

Provide models that can estimate force and moment
generating capacity of the lower limb and reveal
relationships between muscle architecture and
function.
Downloads last week: 32
Total downloads: 5,701
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Full Body Model for use in Dynamic Simulations of Human Gait

Full body musculoskeletal model with
muscle-actuated lower extremity and
torque-actuated torso/upper extremity for use in
dynamic simulations of human movement.
Downloads last week: 28
New download files: 2
Total downloads: 2,234
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Calibrated EMG-Informed Neuromusculoskeletal Modelling Toolbox (CEINMS)

Provides an easy to use toolbox, compatible with
OpenSim, for the estimation of the human lower
extremity muscle and joint dynamics.
Total followers: 28
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XSens - OpenSim modelling

This project intends to assess the feasibility of
using inertia-tracking system (i.e. XSens) to
provide input data for modelling in OpenSim. We
managed to adapt the LaiArnold2017 model to the
'T-pose' used for XSens to scale their
biomechanical model. We also updated the segment
masses to follow deLeva 1996 antropometric data.
New download files: 1
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In Silico Liver (ISL) - Multi-level, multi-attribute model mechanisms

Experiment driven collection of reusable
physiologically based hepatic mechanisms.
New members: 2
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OpenMM

OpenMM includes everything one needs to run modern
molecular simulations. It is extremely flexible
with its custom functions, is open-source, and has
high performance, especially on recent GPUs.
Downloads last week: 680
Forum posts last week: 17
Total followers: 48
Total downloads: 131,931
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High hip flexion musculoskeletal model to perform deep squatting task

Simulation of high flexion tasks such as squatting
is hindered through invalid moment length
estimation when using generic musculoskeletal
models. The purpose of this study was to apply
wrapping surfaces at the hip joint to allow it to
simulate movements that involve substantial hip
flexion (e.g. deep squatting).
New download files: 1
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DeepCell: Deep convolutional neural networks for image segmentation

Provide source code for deep learning based image
segmentation
Downloads last week: 21
Total downloads: 2,484
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Simbody: Multibody Physics API

Simbody is useful for internal coordinate and
coarse grained molecule modeling, large scale
mechanical models like skeletons, and anything
else that can be modeled as bodies interconnected
by joints, acted upon by forces, and restricted by
constraints.
Forum posts last week: 12
Total downloads: 3,943

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Jobs

Assistant, Associate, or Full Professor

The University of Florida October 10, 2018
The Department of Applied Physiology and Kinesiology (APK) at the University of Florida (UF) invites applications for up to two faculty members at the rank of Assistant, Associate, or Full Professor (tenure track or tenured upon hire). The candidate will contribute to the academic areas including biomechanics, motor neuroscience, neurophysiology, orthopedics and/or musculoskeletal rehabilitation.

Assistant Professor in Kinesiology (Physical Behavior Measurement)

The University of Massachusetts Amherst September 24, 2018
The University of Massachusetts Amherst, School of Public Health and Health Sciences, and the Institute for Applied Life Sciences (IALS) seek talented applicants qualified for a faculty position in the Kinesiology Department at the Assistant Professor level who study physical behavior measurement.

Assistant/Associate Professor in Kinesiology (Biomechanics)

The University of Massachusetts Amherst September 24, 2018
The University of Massachusetts Amherst is seeking talented applicants qualified for a faculty position in the Kinesiology Department at the level of Assistant or Associate Professor in the area of Biomechanics. Example areas of interest for scientific inquiry include musculoskeletal modeling, mechanics and energetics of human motion, and sensor development for motion analysis.

Postdoctoral Position in Orthopaedic Biomechanics

Beth Israel Deaconess Medical Center September 10, 2018
The Center for Advanced Orthopaedic Studies at Beth Israel Deaconess Medical Center, Harvard Medical School is seeking a postdoctoral fellow to participate in NIH-funded research examining the influence of spine loading on risk of age-related vertebral fractures, with a particular emphasis on measurement of spine movement and evaluation of dynamic spine loading in vivo.

PhD Scholarships for Musculoskeletal Modeling of Lizards

University of the Sunshine Coast, Australia September 5, 2018
Musculoskeletal models of varanid lizards in OpenSim will be used to predict higher level biological parameters (e.g. running speed) in both living and extinct species. A few PhD scholarships are available to interested students.

See all job openings...

News

Webinar on SimCP - A Simulation Platform to Predict Gait Performance Following Orthopedic Interventions in Children with Cerebral Palsy

OpenSim Sep 6, 2018
Image not availableWe invite you to join us for a webinar featuring Ilse Jonkers and Friedl De Groote from the Human Movement Biomechanics Research Group at KU Leuven in Belgium.

Webinar on robust control strategies for musculoskeletal models using deep reinforcement learning

OpenSim Jul 24, 2018
Image not availableWe invite you to join us for a webinar featuring Łukasz Kidziński from Stanford University giving an introduction to reinforcement learning and its application to developing control strategies.

SimVascular Workshop at WCB Dublin

SimVascular: Cardiovascular Modeling and Simulation May 7, 2018
Image not availableIf you are attending the WCB Dublin 2018, please come to our SimVascular workshop Sunday July 8.

Iliotibial Band Models Uploaded

Muscle-Joint Contact Force Model Oct 14, 2017
Image not availablePreliminary models of Iliotibial Band and Lateral Femoral Epicondyle contact force have been uploaded!

Share Your Models for Teaching Via New Community Group

SimTK Website Oct 11, 2017
Image not availableThe newest community on SimTK is the IMAG-MSM Public Dissemination & Education Working Group (https://simtk.org/category/communityPage.php?cat=1005&sort=date&page=0&srch=&).

SimTK is maintained through Grant R01GM124443 01A1 from the National Institutes of Health (NIH). It was initially developed as part of the Simbios project funded by the NIH as part of the NIH Roadmap for Medical Research, Grant U54 GM072970.

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