The Musculoskeletal Atlas Project

Provides an easy-to-use application for
visualising imaging data, segmenting images,
creating geometric meshes, and exporting OpenSim
and FE models.
Total followers: 21

Matlab MOtion data elaboration TOolbox for NeuroMusculoSkeletal apps (MOtoNMS)

Provide a complete, user friendly and highly
configurable tool to automatically process
experimental motion data from different
laboratories for their use into
neuromusculoskeletal software.
Total followers: 20

Whole-Cell Computational Model of Mycoplasma genitalium

This project provides all code and data for the
first "whole-cell" model of the entire life cycle
of a living organism, Mycoplasma
genitalium.
Downloads last week: 183
New followers: 1
Total downloads: 43,771

Reproducibility in simulation­-based prediction of natural knee mechanics

This project aims for understanding the influence
of modelers’ approaches and decisions
(essentially their art) throughout the lifecycle
of modeling and simulation. It will demonstrate
the uncertainty of delivering consistent
simulation predictions when the founding data to
feed into models remain the same. The project site
also aims to be a hub to provide an overview of
resources for modeling & simulation of the knee
joint. Funding is provided by the National
Institute of Biomedical Imaging and
Bioengineering, National Institutes of Health
(Grant No. R01EB024573).
Downloads last week: 58
New members: 2

Snorkel

Snorkel is an open-source system that generates
training data for information extraction systems,
also known as predictive systems.
Downloads last week: 138
Total downloads: 11,819

Matlab-Opensim Interfaces

Provides tools for using different aspects of
Opensim within the Matlab environment, including
command line pipelines as well as accessing the
Opensim API directly. The main functionality
has now been included as part of Opensim 3.0 with
improved functionality (and will become more
obsolete with Opensim 4.0). Please see the
developer wiki for more information. Therefore
this is being kept only as an archive, and users
should see the documentation on interfacing Matlab
with Opensim on the Opensim website
(http://simtk-confluence.stanford.edu:8080/display
/OpenSim/Scripting+with+Matlab). As such the
forums etc will not be monitored.
New followers: 1
Total downloads: 5,794

MITK-GEM: Software pipeline to GEnerate Models from images

Provides a image analysis application with GUI to
generate finite element models from medical
images.
Downloads last week: 35

FragFEATURE: Knowledge-based Fragment Binding Prediction

Provide a knowledge-based fragment binding
predictor as well as the underlying knowledge
base.
New members: 1

Platform for Dynamic Simulation and Control of Movement based on OpenSim&MATLAB

This project overcomes neuromusculoskeletal
systems limitations of MATLAB®/Simulink® and
robust design & control limitations of OpenSim
through an interface between these two software
packages that combines relevant strengths of each
individual package.
Total followers: 45

Upper Extremity Dynamic Model

Provides the files associated with a dynamic model
of the upper limb for use in SIMM or OpenSim.
Total followers: 26
Total downloads: 4,097

Protonations states changes of repurposing drugs in binding with TMPRSS2 enzyme

The $\beta-Coronavirus$ has been causing immense
losses worldwide, in different aspects. Researches
have indicated a correlation between potential for
inhibition of the SARS-CoV virus and the
physiological pH of the cellular microenvironment.
This researc
New followers: 1

OpenSim Moco

OpenSim Moco solves optimal control problems with
musculoskeletal models defined in OpenSim, using
direct collocation.
Forum posts last week: 14
New download files: 2
New followers: 1

Model of the Scapulothoracic Joint

Provide an OpenSim Joint model that enables a more
accurate representation of scapula mechanics in
musculoskeletal simulations.
Downloads last week: 35
Total followers: 21
Total downloads: 3,972

Below-Knee Amputee Model

The goal of this project is to develop a more
accurate below-knee amputee model that accounts
for the altered anatomy and the socket-limb
interface dynamics.
New followers: 1

Mouse Forelimb Model

Device motion movement
Forum posts last week: 1