Prerequisites Protocols

Initial Goal

A set of magnetic resonance (MR) and computer tomography (CT) images of the extremity specimen (upper/lower leg, upper/lower arm) with clear visual delineation of skin, fat, and muscle layers.

Infrastructure

Modality

Manufacturer

Model

MRI

Siemens

3T Skyra

CT

Siemens

SOMATOM Definition Edge

Workflow

Schedule MRI/CT

Preparation

Position/Orientation in MRI/CT

Acquire Image Sequences

For each segment (upper leg, lower leg, upper arm, and lower arm), the following set of image collection protocols will be performed. All images should be acquired in the same coordinate system to be able to align reconstructed tissue geometries during assembly of the full segment geometry. To accomplish this

Notes for CT

MRI Specifications

Image Acquisition Properties: Download T1 SettingsDownload PD Settings

T1 w/o Fat Sup

T1 w/ Fat Sup

Proton Density

Plane

Axial

FS

No

Yes

No

Matrix (phase)

389

Matrix (freq.)

512

No. of slices

25

No. of Seq/Segment

4

FOV (mm)

240 x 202.5

Slice thickness/gap (mm/mm)

2/1

Flip angle (deg.)

30

150

TE/TR (ms/ms)

11/500

9.7/4000

Bandwidth (Hz/pixel)

238

222

Chemical shift (pixels)

N/A

No. excitations averaged

1

Turbo Factor

3

Phase encode axis

Anterior-posterior

Distance factor (%)

50%

Phase oversampling

0

Slice oversampling

0

Phase resolution (%)

90

Phase partial Fourier (8/8 = 1)

OFF

Readout partial Fourier (8/8 = 1)

OFF

Slice partial Fourier (8/8 = 1)

7/8

X-resolution (mm)

0.5

Y-resolution (mm)

0.5

Scan Time / Seq. (min.)

~3 min

CT Specifications

Slice thickness/gap (mm/mm)

0.6/0

Reconstruction Interval (mm)

0.6

Recon Type / Kernel

B40 - medium - Abdomen window

Voltage

140 kVP