org.simtk.moleculargraphics.cartoon
Class BetaStrandRibbon

java.lang.Object
  org.simtk.moleculargraphics.cartoon.ActorCartoonClass
      org.simtk.moleculargraphics.cartoon.ProteinRibbonSegment
          org.simtk.moleculargraphics.cartoon.BetaStrandRibbon

All Implemented Interfaces:

ActorCartoon, BaseCartoon, ResidueHighlightListener

public class BetaStrandRibbon
extends ProteinRibbonSegment

Author:

Christopher Bruns A single beta strand in a protein

Field Summary

protected double

lengthResolution

Fields inherited from class org.simtk.moleculargraphics.cartoon.ActorCartoonClass

actor, highlightActor, highlightMapper, highlightToonColors, invisibleColorScheme, isPopulated, mapper

Constructor Summary

BetaStrandRibbon(java.util.List<Residue> residues, double ribbonThickness, double strandWidth, int startIndex, Spline3D positionSpline, Spline3D normalSpline)

Method Summary

protected void	createArrow(java.util.List<Vector3D> positions, java.util.List<Vector3D> normals, java.util.List<Chemical> objects, double ribbonThickness, double arrowWidth)
protected void	createBetaStrand(java.util.List<Residue> residues, double ribbonThickness, double strandWidth, int startIndex, Spline3D positionSpline, Spline3D normalSpline)
protected void	oldCreateBetaStrand(java.util.List<Residue> residues, double ribbonThickness, double strandWidth, int startIndex, Spline3D positionSpline, Spline3D normalSpline)

Methods inherited from class org.simtk.moleculargraphics.cartoon.ProteinRibbonSegment

chainDirection, createExtrudedRibbon, createPolyLine, finishVtkPipeline, hBondNormal

Methods inherited from class org.simtk.moleculargraphics.cartoon.ActorCartoonClass

colorToon, colorToon, getActor, getChemicalFromScalar, getColorIndex, getHighlightActor, getMapper, highlightResidue, highlightResidueByAtomScalars, highlightResidueByResidueScalars, isPopulated, unhighlightResidue, unhighlightResidueByAtomScalars, unhighlightResidueByResidueScalars, unhighlightResidues

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

lengthResolution

protected double lengthResolution

Constructor Detail

BetaStrandRibbon

public BetaStrandRibbon(java.util.List<Residue> residues,
                        double ribbonThickness,
                        double strandWidth,
                        int startIndex,
                        Spline3D positionSpline,
                        Spline3D normalSpline)
                 throws NoCartoonCreatedException

Throws:

NoCartoonCreatedException

Method Detail

createBetaStrand

protected void createBetaStrand(java.util.List<Residue> residues,
                                double ribbonThickness,
                                double strandWidth,
                                int startIndex,
                                Spline3D positionSpline,
                                Spline3D normalSpline)
                         throws NoCartoonCreatedException

Throws:

NoCartoonCreatedException

oldCreateBetaStrand

protected void oldCreateBetaStrand(java.util.List<Residue> residues,
                                   double ribbonThickness,
                                   double strandWidth,
                                   int startIndex,
                                   Spline3D positionSpline,
                                   Spline3D normalSpline)
                            throws NoCartoonCreatedException

Throws:

NoCartoonCreatedException

createArrow

protected void createArrow(java.util.List<Vector3D> positions,
                           java.util.List<Vector3D> normals,
                           java.util.List<Chemical> objects,
                           double ribbonThickness,
                           double arrowWidth)