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BHMM toolkit
The Bayesian HMM Matlab toolkit.
BHMM 2011-11-01
Nov 01, 2011

First public release.  

Download Links

Nov 01, 2011
50 KB
Any
Source code
Matlab code for BHMM (with Java acceleration)

Nov 01, 2011
67 MB
Any
Source code
Validation scripts for BHMM.

PLEASE CITE THESE PAPERS

John D. Chodera, Phillip Elms, Frank Noé, Bettina Keller, Christian M. Kaiser, Aaron Ewall-Wice, Susan Marqusee, Carlos Bustamante, and Nina Singhal Hinrichs. Bayesian hidden Markov model analysis of single-molecule force spectroscopy: Characterizing kinetics under measurement uncertainty. arXiv:1108.1430 (preprint) (2011) View


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