Hierarchy For Package org.simtk.molecularstructure

Package Hierarchies:

All Packages

Class Hierarchy

• java.lang.Object
  • org.simtk.molecularstructure.FunctionalGroup
  • org.simtk.molecularstructure.MolecularClass (implements org.simtk.molecularstructure.Molecular)
    • org.simtk.molecularstructure.MoleculeClass (implements org.simtk.molecularstructure.Molecule)
      • org.simtk.molecularstructure.BiopolymerClass (implements org.simtk.molecularstructure.Biopolymer)
    • org.simtk.molecularstructure.MoleculeCollection
    • org.simtk.molecularstructure.ResidueClass (implements org.simtk.molecularstructure.Residue)
  • org.simtk.molecularstructure.ResidueTypeClass (implements org.simtk.molecularstructure.ResidueType)
  • org.simtk.molecularstructure.SecondaryStructureClass (implements org.simtk.molecularstructure.SecondaryStructure)
  • org.simtk.molecularstructure.SequenceAlignment
  • java.lang.Throwable (implements java.io.Serializable)
    • java.lang.Exception
      • org.simtk.molecularstructure.InsufficientAtomsException

Interface Hierarchy

• org.simtk.molecularstructure.Chemical
  • org.simtk.molecularstructure.Molecular (also extends org.simtk.geometry3d.MassBody)
    • org.simtk.molecularstructure.Molecule
      • org.simtk.molecularstructure.Biopolymer
    • org.simtk.molecularstructure.Residue (also extends org.simtk.molecularstructure.ResidueType)
• org.simtk.geometry3d.MassBody
  • org.simtk.molecularstructure.Molecular (also extends org.simtk.molecularstructure.Chemical)
    • org.simtk.molecularstructure.Molecule
      • org.simtk.molecularstructure.Biopolymer
    • org.simtk.molecularstructure.Residue (also extends org.simtk.molecularstructure.ResidueType)
• org.simtk.molecularstructure.ResidueType
  • org.simtk.molecularstructure.Residue (also extends org.simtk.molecularstructure.Molecular)
• org.simtk.molecularstructure.SecondaryStructure

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    • org.simtk.molecularstructure.SecondaryStructureClass.SourceType