org.simtk.molecularstructure
Interface Molecule

All Superinterfaces:

Chemical, MassBody, Molecular

All Known Subinterfaces:

Biopolymer, LocatedProtein, Protein

All Known Implementing Classes:

BiopolymerClass, DNA, MoleculeClass, NucleicAcid, PDBProteinClass, RNA

public interface Molecule
extends Molecular

Method Summary

java.util.Collection<SecondaryStructureClass.SourceType>	getDisplaySourceTypes()
java.lang.String	getPdbChainId()
boolean	isSolvent()
void	setDisplaySourceTypes(java.util.Collection<SecondaryStructureClass.SourceType> sourceTypes)

Methods inherited from interface org.simtk.molecularstructure.Molecular

atoms, bestPlane3D

Methods inherited from interface org.simtk.geometry3d.MassBody

getCenterOfMass, getMass

Method Detail

isSolvent

boolean isSolvent()

getPdbChainId

java.lang.String getPdbChainId()

getDisplaySourceTypes

java.util.Collection<SecondaryStructureClass.SourceType> getDisplaySourceTypes()

setDisplaySourceTypes

void setDisplaySourceTypes(java.util.Collection<SecondaryStructureClass.SourceType> sourceTypes)