Here is a list of all class members with links to the classes they belong to:
- a -
- AcetylResidue()
: SimTK::AcetylResidue
- Actinium()
: SimTK::Element::Actinium
- addAtom()
: SimTK::ResidueInfo
, SimTK::DuMMForceFieldSubsystem
, SimTK::AtomSubsystem
, SimTK::PdbResidue
, SimTK::VanDerWaalsForce
- addBodyExclusion()
: SimTK::AtomSubsystem
- addBond()
: SimTK::AtomSubsystem
, SimTK::DuMMForceFieldSubsystem
- addBoundarySphere()
: SimTK::VanDerWaalsForce
- addCompoundSynonym()
: SimTK::Compound
- addFirstBondCenter()
: SimTK::Compound
- addLeftHandedBondCenter()
: SimTK::Compound
- addPlanarBondCenter()
: SimTK::Compound
- addRightHandedBondCenter()
: SimTK::Compound
- addRingClosingBond()
: SimTK::Compound
- addSecondBondCenter()
: SimTK::Compound
- AdenineBase()
: SimTK::AdenineBase
- Adenylate()
: SimTK::RibonucleotideResidue::Adenylate
- adoptCompound()
: SimTK::CompoundSystem
- Alanine()
: SimTK::AminoAcidResidue::Alanine
- AlcoholOHGroup()
: SimTK::AlcoholOHGroup
- AliphaticCarbon()
: SimTK::AliphaticCarbon
- AliphaticHydrogen()
: SimTK::AliphaticHydrogen
- Aluminium
: SimTK::Element
- Aluminum()
: SimTK::Element::Aluminum
- Amber99ForceSubsystem()
: SimTK::Amber99ForceSubsystem
- Americium()
: SimTK::Element::Americium
- AminoAcidResidue()
: SimTK::AminoAcidResidue
- Antimony()
: SimTK::Element::Antimony
- appendResidue()
: SimTK::Biopolymer
, SimTK::PdbChain
- area_t
: SimTK::AtomSubsystem
, SimTK::VanDerWaalsForce
- Arginine()
: SimTK::AminoAcidResidue::Arginine
- Argon()
: SimTK::Biotype
, SimTK::Argon
, SimTK::Element::Argon
- AromaticSixMemberedCHGroup()
: SimTK::AromaticSixMemberedCHGroup
- Arsenic()
: SimTK::Element::Arsenic
- Asparagine()
: SimTK::AminoAcidResidue::Asparagine
- Aspartate()
: SimTK::AminoAcidResidue::Aspartate
- assignBiotypes()
: SimTK::BiopolymerResidue
, SimTK::Biopolymer
- assignResidueBiotypes()
: SimTK::Biopolymer
- Astatine()
: SimTK::Element::Astatine
- atEnd()
: SimTK::AtomSubsystem::PairIterator
- Atom()
: SimTK::AtomSubsystem::Atom
- AtomBonding()
: SimTK::CompoundModeler::AtomBonding
- AtomicBodies
: SimTK::AtomSubsystem
- atomIndex
: SimTK::VanDerWaalsForce::VdwAtom
- AtomIndex
: SimTK::VanDerWaalsForce
- AtomIndexList
: SimTK::AtomSubsystem
- AtomInfo()
: SimTK::ResidueInfo::AtomInfo
- AtomName
: SimTK::Compound
- AtomPathName
: SimTK::Compound
- atoms
: SimTK::AtomSubsystem::AtomsByBody
- AtomsByBody()
: SimTK::AtomSubsystem::AtomsByBody
- AtomSubsystem
: SimTK::AtomSubsystem::Atom
, SimTK::AtomSubsystem
- atomSubsystem
: SimTK::VanDerWaalsForce
- AtomTargetLocations
: SimTK::Compound
- attachAtomToBody()
: SimTK::DuMMForceFieldSubsystem
- attachClusterToBody()
: SimTK::DuMMForceFieldSubsystem
- AUTOMATIC
: SimTK::AtomSubsystem