Here is a list of all class members with links to the classes they belong to:
- g -
- Gadolinium()
: SimTK::Element::Gadolinium
- Gallium()
: SimTK::Element::Gallium
- generateAllBiotypeCode()
: SimTK::Biotype
- generateBiotypeChargedAtomTypeSelfCode()
: SimTK::DuMMForceFieldSubsystem
- generatePossibleAtomNames()
: SimTK::PdbAtom
- generateSelfCode()
: SimTK::Biotype
- Germanium()
: SimTK::Element::Germanium
- get()
: SimTK::Biotype
- getAllowOpenMMReference()
: SimTK::DuMMForceFieldSubsystem
- getAlternateLocationIndicator()
: SimTK::PdbAtomLocation
, SimTK::PdbAtom
- getAmberImproperTorsionGlobalScaleFactor()
: SimTK::DuMMForceFieldSubsystem
- getArgumentSize()
: SimTK::SinusoidFunction
- getAtom()
: SimTK::AtomSubsystem
, SimTK::PdbResidue
, SimTK::PdbChain
, SimTK::PdbModel
, SimTK::PdbStructure
- getAtomBiotypeIndex()
: SimTK::Compound
- getAtomBody()
: SimTK::DuMMForceFieldSubsystem
- getAtomBodyStationInGround()
: SimTK::AtomSubsystem
- getAtomBonding()
: SimTK::CompoundModeler
- getAtomClassIndex()
: SimTK::DuMMForceFieldSubsystem
- getAtomDefaultColor()
: SimTK::DuMMForceFieldSubsystem
- getAtomElement()
: SimTK::Compound
, SimTK::DuMMForceFieldSubsystem
- getAtomicNumber()
: SimTK::Element
- getAtomIndex()
: SimTK::AtomSubsystem::Atom
, SimTK::Compound
, SimTK::ResidueInfo
- getAtomIndexOfIncludedAtom()
: SimTK::DuMMForceFieldSubsystem
- getAtomIndexOfNonbondAtom()
: SimTK::DuMMForceFieldSubsystem
- getAtomInfo()
: SimTK::ResidueInfo
- getAtomLocationInGround()
: SimTK::AtomSubsystem
- getAtomLocationInMobilizedBodyFrame()
: SimTK::Compound
- getAtomMass()
: SimTK::DuMMForceFieldSubsystem
- getAtomMobilizedBodyIndex()
: SimTK::Compound
- getAtomName()
: SimTK::Biotype
, SimTK::Compound
, SimTK::ResidueInfo
- getAtomRadius()
: SimTK::DuMMForceFieldSubsystem
- getAtomStationInCluster()
: SimTK::DuMMForceFieldSubsystem
- getAtomStationOnBody()
: SimTK::DuMMForceFieldSubsystem
- getAtomSubsystem()
: SimTK::CompoundModeler
- getAtomSynonyms()
: SimTK::ResidueInfo
- getAtomVelocityInGround()
: SimTK::AtomSubsystem
- getBathTemperature()
: SimTK::VelocityRescalingThermostat
- getBiotypeChargedAtomType()
: SimTK::DuMMForceFieldSubsystem
- getBodyAtoms()
: SimTK::AtomSubsystem
- getBond()
: SimTK::AtomSubsystem
- getBondAtom()
: SimTK::DuMMForceFieldSubsystem
- getBondAtomIndex()
: SimTK::Compound
- getBondBendGlobalScaleFactor()
: SimTK::DuMMForceFieldSubsystem
- getBondStretchGlobalScaleFactor()
: SimTK::DuMMForceFieldSubsystem
- getBondTorsionGlobalScaleFactor()
: SimTK::DuMMForceFieldSubsystem
- getByAtomicNumber()
: SimTK::Element
- getBySymbol()
: SimTK::Element
- getChain()
: SimTK::PdbModel
- getChainId()
: SimTK::PdbChain
- getChargedAtomTypeIndex()
: SimTK::DuMMForceFieldSubsystem
- getClusterBody()
: SimTK::DuMMForceFieldSubsystem
- getClusterPlacementInCluster()
: SimTK::DuMMForceFieldSubsystem
- getClusterPlacementOnBody()
: SimTK::DuMMForceFieldSubsystem
- getCompound()
: SimTK::CompoundSystem
- getCompoundAtomIndex()
: SimTK::CompoundModeler::AtomBonding
- getCompoundName()
: SimTK::Compound
- getCoordinates()
: SimTK::PdbAtomLocation
, SimTK::PdbAtom
- getCoulombGlobalScaleFactor()
: SimTK::DuMMForceFieldSubsystem
- getCustomBondBendGlobalScaleFactor()
: SimTK::DuMMForceFieldSubsystem
- getCustomBondStretchGlobalScaleFactor()
: SimTK::DuMMForceFieldSubsystem
- getCustomBondTorsionGlobalScaleFactor()
: SimTK::DuMMForceFieldSubsystem
- getDesiredMassCenterLocation()
: SimTK::MassCenterMotionRemover
- getDuMMAtomIndex()
: SimTK::Compound
- getElement()
: SimTK::Biotype
- getElementDefaultColor()
: SimTK::DuMMForceFieldSubsystem
- getForceEvaluationCount()
: SimTK::DuMMForceFieldSubsystem
- getGbsaGlobalScaleFactor()
: SimTK::DuMMForceFieldSubsystem
- getIncludedAtomIndexOfNonbondAtom()
: SimTK::DuMMForceFieldSubsystem
- getIndex()
: SimTK::Biotype
, SimTK::ResidueInfo
- getInsertionCode()
: SimTK::PdbResidue
- getLocation()
: SimTK::PdbAtom
- getMass()
: SimTK::AtomSubsystem::Atom
, SimTK::Element
- getMassCenterLocationTolerance()
: SimTK::MassCenterMotionRemover
- getMaxDerivativeOrder()
: SimTK::SinusoidFunction
- getMobilizedBodyIndex()
: SimTK::AtomSubsystem::Atom
- getModel()
: SimTK::PdbStructure
- getMolecularMechanicsForceSubsystem()
: SimTK::MolecularMechanicsSystem
- getMultibodySystem()
: SimTK::AtomSubsystem
- getName()
: SimTK::PdbAtom
, SimTK::ResidueInfo
, SimTK::Element
, SimTK::PdbResidue
- getNames()
: SimTK::ResidueInfo::AtomInfo
, SimTK::ResidueInfo
- getNChains()
: SimTK::PdbModel
- getNextUnusedAtomClassIndex()
: SimTK::DuMMForceFieldSubsystem
- getNextUnusedChargedAtomTypeIndex()
: SimTK::DuMMForceFieldSubsystem
- getNResidues()
: SimTK::Biopolymer
- getNumAtoms()
: SimTK::AtomSubsystem
, SimTK::Compound
, SimTK::ResidueInfo
, SimTK::DuMMForceFieldSubsystem
, SimTK::PdbResidue
, SimTK::PdbChain
- getNumBodies()
: SimTK::AtomSubsystem
- getNumBondCenters()
: SimTK::Compound
- getNumBonds()
: SimTK::AtomSubsystem
, SimTK::Compound
, SimTK::DuMMForceFieldSubsystem
- getNumChains()
: SimTK::PdbModel
- getNumCompounds()
: SimTK::CompoundSystem
- getNumExcludedDofs()
: SimTK::VelocityRescalingThermostat
- getNumIncludedAtoms()
: SimTK::DuMMForceFieldSubsystem
- getNumModels()
: SimTK::PdbStructure
- getNumNonbondAtoms()
: SimTK::DuMMForceFieldSubsystem
- getNumResidues()
: SimTK::Biopolymer
, SimTK::PdbChain
- getNumThreadsInUse()
: SimTK::DuMMForceFieldSubsystem
- getNumThreadsRequested()
: SimTK::DuMMForceFieldSubsystem
- getOccupancy()
: SimTK::PdbAtomLocation
, SimTK::PdbAtom
- getOneLetterCode()
: SimTK::BiopolymerResidue
- getOpenMMPlatformInUse()
: SimTK::DuMMForceFieldSubsystem
- getOrdinality()
: SimTK::Biotype
- getParentCompoundAtomIndex()
: SimTK::BiopolymerResidue
- getPdbAtomLocation()
: SimTK::PdbAtom
- getPdbChainId()
: SimTK::Compound
- getPdbInsertionCode()
: SimTK::ResidueInfo
- getPdbResidueName()
: SimTK::Compound
, SimTK::ResidueInfo
- getPdbResidueNumber()
: SimTK::Compound
, SimTK::ResidueInfo
, SimTK::PdbResidue
- getRep()
: SimTK::AtomSubsystem
- getResidue()
: SimTK::Biopolymer
, SimTK::PdbChain
, SimTK::Biopolymer
- getResidueAtomLocationInMobilizedBodyFrame()
: SimTK::Biopolymer
- getResidueAtomMobilizedBodyIndex()
: SimTK::Biopolymer
- getResidueId()
: SimTK::PdbResidue
- getResidueName()
: SimTK::Biotype
, SimTK::Biopolymer
- getResidueTypeName()
: SimTK::BiopolymerResidue
- getRigidUnit()
: SimTK::CompoundModeler
- getSocketNumber()
: SimTK::VmdConnection
- getSoluteDielectric()
: SimTK::DuMMForceFieldSubsystem
- getSolventDielectric()
: SimTK::DuMMForceFieldSubsystem
- getSource()
: SimTK::Vec3Pair
- getStationInBodyFrame()
: SimTK::AtomSubsystem::Atom
- getSubcompound()
: SimTK::Compound
- getSubcompoundFrameInParentFrame()
: SimTK::Compound
- getSymbol()
: SimTK::Element
- getTarget()
: SimTK::Vec3Pair
- getTemperature()
: SimTK::VelocityRescalingThermostat
- getTemperatureFactor()
: SimTK::PdbAtomLocation
, SimTK::PdbAtom
- getThreeLetterCode()
: SimTK::BiopolymerResidue
- getTinkerBiotypeIfAny()
: SimTK::Biotype
- getTopLevelTransform()
: SimTK::Compound
- getTransformAndResidual()
: SimTK::Compound
- getUseMultithreadedComputation()
: SimTK::DuMMForceFieldSubsystem
- getUseOpenMMAcceleration()
: SimTK::DuMMForceFieldSubsystem
- getValence()
: SimTK::Biotype
- getVdwGlobalScaleFactor()
: SimTK::DuMMForceFieldSubsystem
- getVdwMixingRule()
: SimTK::DuMMForceFieldSubsystem
- getVdwMixingRuleName()
: SimTK::DuMMForceFieldSubsystem
- getVdwRadius()
: SimTK::DuMMForceFieldSubsystem
- getVdwWellDepth()
: SimTK::DuMMForceFieldSubsystem
- getWeight()
: SimTK::Vec3Pair
- Glutamate()
: SimTK::AminoAcidResidue::Glutamate
- Glutamine()
: SimTK::AminoAcidResidue::Glutamine
- Glycine()
: SimTK::AminoAcidResidue::Glycine
- Gold()
: SimTK::Element::Gold
- GrinPointer()
: SimTK::GrinPointer< PointeeType >
- GuanineBase()
: SimTK::GuanineBase
- Guanylate()
: SimTK::RibonucleotideResidue::Guanylate