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Distributions are available as zipped java executables and associated materials, or as a zipped netbeans project with associated libraries (in JARs) and pre-built executables.
msmexplorer
MSMExplorer
A Visualization Application for Markov State Models for protein-folding simulations generated by MSMBuilder
MSMExplorer 0.9
Dec 28, 2012

Some bug fixes and a new walkthrough for learning MSMExplorer

Download Links

Dec 27, 2012
12 MB
Any
Application/binary
Zipball with Source and Precompiled JAR

Previous Releases


MSMExplorer 0.85

Sep 11, 2012

Several adjustments and few additional features, including TPT visibility filter on GraphView, warning on opening weird probabilities, and bug fixes.

Download Links

Sep 11, 2012
10 MB
Any
Application/binary
Zipball with Source and Precompiled JAR


MSMExplorer 0.8

Aug 20, 2012

Bug fixes and new features, including full support for adding new data columns and allowing visualization parameters to change with arbitrary data. More complete axis layout support and aesthetic controls. New PDF reference documentation.

Download Links

Aug 20, 2012
11 MB
Any
Application/binary
Java Source and Precompiled JAR


MSMExplorer 0.04

Jul 30, 2012

MSMExplorer including precompiled JAR, some documentation, and source.

Download Links

Jul 30, 2012
10 MB
Any
Application/binary
Java Source and Executable


0.03

Jul 26, 2012

Version contains numerous bug fixes and some significant new features, including support for MSM hierarchies and arbitrary graphing.

Download Links

Jul 26, 2012
10 MB
Any
Application/binary
Contains source and precompiled JAR


0.02

Jun 13, 2011

Several improvements including TPT graph layout on equilibrium probability axis, native MSM open, GraphML save, node visibility filtering based on equilibrium probability, graph statistics, proper self-edge rendering.Notes

Download Links

Jun 13, 2011
7 MB
Any
Source code
Source NB Project with code, libraries, and pre-built executable

Jun 13, 2011
4 MB
Any
Application/binary
MSMExplorer Java Executable and associated files


MSMExplorer Source

Aug 30, 2010

Download Links

Aug 30, 2010
5 MB
Other
Source code
Zipped Netbeans 6.9 Project Directory


MSMExplorer Binary

Aug 30, 2010

Binary .jar and necessary files

Download Links

Aug 30, 2010
2 MB
Other
Application/binary
Zipped dist folder


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