Provide a simple, powerful tool for maximizing the utility of Markov State Models for understanding folding phenomena.
A java-based visualization application for Markov State Models for folding simulations. The programs is designed as a gui interface for viewing and interacting with MSMs constructed by MSMBuilder.
SOURCE CODE NOTICE:
for up-to-date source code access please visit:
Similarly, Up-to-date distributions can be downloaded from
but periodic major releases (considered "stable") will still be uploaded to simtk.
In the Documents section of this site, you'll find an illustrated Reference and Tutorial PDF and a short tutorial video.