A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

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NAVAJO_WHITE - Static variable in class org.simtk.util.ColorName

NAVAJO_WHITE1 - Static variable in class org.simtk.util.ColorName

NAVAJO_WHITE2 - Static variable in class org.simtk.util.ColorName

NAVAJO_WHITE3 - Static variable in class org.simtk.util.ColorName

NAVAJO_WHITE4 - Static variable in class org.simtk.util.ColorName

NAVY - Static variable in class org.simtk.util.ColorName

NAVY_BLUE - Static variable in class org.simtk.util.ColorName

neckLength - Variable in class org.simtk.moleculargraphics.cartoon.vtkArrowWidthFilter

neighborKeys(Vector3D, double) - Method in class org.simtk.geometry3d.Hash3D

Find positions of all objects within a specified radius of a specified point.

neighborValues(Vector3D, double) - Method in class org.simtk.geometry3d.Hash3D

Find all objects within a specified radius of a specified point This method has constant asymptotic time complexity.

NewBackboneCurveActor - Class in org.simtk.moleculargraphics.cartoon

NewBackboneCurveActor(double, double, Molecule) - Constructor for class org.simtk.moleculargraphics.cartoon.NewBackboneCurveActor

NewDuplexCylinderActor - Class in org.simtk.moleculargraphics.cartoon

nextColorIndex - Variable in class org.simtk.moleculargraphics.cartoon.ToonColors

nextResidue - Variable in class org.simtk.molecularstructure.ResidueClass

NICKEL - Static variable in class org.simtk.molecularstructure.atom.ChemicalElementClass

NITROGEN - Static variable in class org.simtk.molecularstructure.atom.ChemicalElementClass

NoCartoonCreatedException - Exception in org.simtk.moleculargraphics.cartoon

norm1() - Method in class Jama.Matrix

One norm

norm2() - Method in class Jama.Matrix

Two norm

norm2() - Method in class Jama.SingularValueDecomposition

Two norm

normF() - Method in class Jama.Matrix

Frobenius norm

normInf() - Method in class Jama.Matrix

Infinity norm

notifyObservers(Object) - Method in class org.simtk.gui.ProgressManager

notifyObservers() - Method in class org.simtk.gui.ProgressManager

notifyObservers() - Method in interface org.simtk.mvc.ObservableInterface

notifyObservers(Object) - Method in interface org.simtk.mvc.ObservableInterface

NucleicAcid - Class in org.simtk.molecularstructure.nucleicacid

NucleicAcid(char) - Constructor for class org.simtk.molecularstructure.nucleicacid.NucleicAcid

Nucleotide - Class in org.simtk.molecularstructure.nucleicacid

Nucleotide(char, String, String) - Constructor for class org.simtk.molecularstructure.nucleicacid.Nucleotide

NucleotideStickCartoon - Class in org.simtk.moleculargraphics.cartoon

NucleotideStickCartoon() - Constructor for class org.simtk.moleculargraphics.cartoon.NucleotideStickCartoon

NucleotideStickCartoon(double) - Constructor for class org.simtk.moleculargraphics.cartoon.NucleotideStickCartoon

numberFont - Variable in class org.simtk.moleculargraphics.SequenceCanvas

NumberTick - Class in org.simtk.toon.secstruct

NussinovDiagram - Class in org.simtk.toon.secstruct

NussinovDiagram(Biopolymer) - Constructor for class org.simtk.toon.secstruct.NussinovDiagram