The overall goal of the Open Knee(s) project is to deliver finite element representation of six knee joints; inclusive of tibiofemoral and patellofemoral articulations and representative of young & elderly, male & female, and healthy & osteoarthritic. The roadmap, including versioning, and the timeline can be found in the section Open Knee(s) Models. It is anticipated that various general purpose scripts will be developed to assist modeling and simulation tasks. Versioning and roadmap of these are noted in the section Open Knee(s) Utilities. A list of available infrastructure can be found in the section Infrastructure. A list of specifications for experimentation, modeling, and simulation tasks can be found in the section Specifications. The developers are encouraged to check all tasks at https://simtk.org/pm/?group_id=485.
Contents
Open Knee(s) Models
Versioning
Releases of Open Knee(s) models rely on the following version numbering scheme:
Generation <#> Specimen <#> Version version.major.minor.revision
- version
- numbering based on goals of the roadmap
- major
- implementation of a new feature
- minor
- improvement of a feature or a bug fix
- revision
- revision number of the subversion repository on which the release is based on OR if disseminating data, date of the in-house data management repository on which the release is based on
For example, Open Knee(s) Generation 2 Specimen 4 Version 2.1.2.986 (OR Version 0.1.0.20150416)
Roadmap
Open Knee(s) Generation 2 aims at six knee joint models representative of young & elderly, male & female, and healthy & osteoarthritic. The roadmap to accomplish the development and evaluation of these models will not follow any particular order of any specimen specifics:
- Specimen 1
- Specimen 2
- Specimen 3
- Specimen 4
- Specimen 5
- Specimen 6
Within each specimen, versions are targeted to delivery of following milestones:
Version 0.1: Anatomical data
Version 0.2: + Joint mechanics data
Version 0.3: + Tissue mechanics data
Version 0.4 and above: + Various model generation steps
Version 1.0 and above: + Working knee joint model (tibiofemoral and patellofemoral)
Version 2.0 and above: + Evaluated knee joint model (correspondence of predictive capacity against experimental data)
Timeline
The tentative timeline is provided below for reference (as indicated in the grant application).
May 2014 |
Open Knee(s) Generation 2 Specimen 1 Version 0.3 |
August 2014 |
Open Knee(s) Generation 2 Specimen 1 Version 1.0 |
November 2014 |
Open Knee(s) Generation 2 Specimen 2 Version 0.3 |
February 2015 |
Open Knee(s) Generation 2 Specimen 2 Version 1.0 |
February 2015 |
Open Knee(s) Generation 2 Specimen 3 Version 0.3 |
May 2015 |
Open Knee(s) Generation 2 Specimen 3 Version 1.0 |
May 2015 |
Open Knee(s) Generation 2 Specimen 4 Version 0.3 |
August 2015 |
Open Knee(s) Generation 2 Specimen 4 Version 1.0 |
November 2015 |
Open Knee(s) Generation 2 Specimen 5 Version 0.3 |
February 2016 |
Open Knee(s) Generation 2 Specimen 5 Version 1.0 |
February 2016 |
Open Knee(s) Generation 2 Specimen 6 Version 0.3 |
May 2016 |
Open Knee(s) Generation 2 Specimen 6 Version 1.0 |
This schedule changes due to logistics of experimentation, i.e. delivery of different versions for different specimens will likely be out of order. The following table summarizes the actual schedule where data and models were made available:
April 2015 |
Open Knee(s) Generation 2 Specimen 1 Version 0.1 |
August 2015 |
Open Knee(s) Generation 2 Specimen 1 Version 0.2 |
April 2015 |
Open Knee(s) Generation 2 Specimen 2 Version 0.1 |
September 2015 |
Open Knee(s) Generation 2 Specimen 2 Version 0.2 |
April 2015 |
Open Knee(s) Generation 2 Specimen 3 Version 0.1 |
October 2015 |
Open Knee(s) Generation 2 Specimen 3 Version 0.2 |
April 2015 |
Open Knee(s) Generation 2 Specimen 4 Version 0.1 |
October 2015 |
Open Knee(s) Generation 2 Specimen 4 Version 0.2 |
April 2015 |
Open Knee(s) Generation 2 Specimen 6 Version 0.1 |
September 2015 |
Open Knee(s) Generation 2 Specimen 6 Version 0.2 |
April 2015 |
Open Knee(s) Generation 2 Specimen 7 Version 0.1 |
October 2015 |
Open Knee(s) Generation 2 Specimen 7 Version 0.2 |
June 2015 |
Open Knee(s) Generation 2 Specimen 8 Version 0.1 |
October 2015 |
Open Knee(s) Generation 2 Specimen 8 Version 0.2 |
December 2015 |
Open Knee(s) Generation 2 Specimen 9 Version 0.1 |
December 2015 |
Open Knee(s) Generation 2 Specimen 9 Version 0.2 |
Models Under Development
Open Knee(s) Generation 2 Specimen 1: oks001
Open Knee(s) Generation 2 Specimen 2: oks002
Open Knee(s) Generation 2 Specimen 3: oks003
Open Knee(s) Generation 2 Specimen 4: oks004
Open Knee(s) Generation 2 Specimen 5: oks005
Open Knee(s) Generation 2 Specimen 6: oks006
Open Knee(s) Generation 2 Specimen 7: oks007
Open Knee(s) Generation 2 Specimen 8: oks008
Open Knee(s) Generation 2 Specimen 9: oks009
Progress
Segmentation
- Authors
- AE = Ahmet Erdemir, CB = Craig Bennetts, SC = Snehal Chokhandre, RC = Robb Colbrunn, TB = Tara Bonner, OG = Omar Gad, CPL = Connor Lough
Bone Segmentation
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oks001 |
oks002 |
oks003 |
oks004 |
oks006 |
oks007 |
oks008 |
oks009 |
FMB (femur) |
SC_01 in progress |
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TBB (tibia) |
SC_01 in progress |
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FBB (fibula) |
SC_01 in progress |
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PTB (patella) |
RC |
Cartilage Segmentation
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oks001 |
oks002 |
oks003 |
oks004 |
oks006 |
oks007 |
oks008 |
oks009 |
FMC (femoral) |
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TBC-M (medial tibial) |
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TBC-L (lateral tibial) |
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PTC (patellar) |
CB (reference) OG RC |
RC |
RC |
RC |
RC |
RC |
RC |
RC |
Menisci Segmentation
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oks001 |
oks002 |
oks003 |
oks004 |
oks006 |
oks007 |
oks008 |
oks009 |
MNS-M (medial) |
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MNS-L (lateral) |
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Connective Tissues Segmentation - Ligaments and Tendons
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oks001 |
oks002 |
oks003 |
oks004 |
oks006 |
oks007 |
oks008 |
oks009 |
ACL |
CB (reference) OG AE |
AE |
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MCL |
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PCL |
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LCL |
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PTL (patellar ligament) |
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QAT (quadriceps tendon) |
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Registration Markers Segmentation
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oks001 |
oks002 |
oks003 |
oks004 |
oks006 |
oks007 |
oks008 |
oks009 |
FMR-L |
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FMR-M |
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FMR-P |
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PTR-L |
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PTR-M |
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PTR-S |
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TBR-L |
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TBR-M |
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TBR-P |
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Geometry
Bone Geometry
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oks001 |
oks002 |
oks003 |
oks004 |
oks006 |
oks007 |
oks008 |
oks009 |
FMB (femur) |
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TBB (tibia) |
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FBB (fibula) |
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PTB (patella) |
CB_LVTIT_07 (reference) CB_RAW CPL_LVTIT_01 CPL_RAW_01RC_LVTIT_01RC_RAW_01 |
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Cartilage Geometry
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oks001 |
oks002 |
oks003 |
oks004 |
oks006 |
oks007 |
oks008 |
oks009 |
FMC (femoral) |
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TBC-M (medial tibial) |
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TBC-L (lateral tibial) |
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PTC (patellar) |
CB_LVTIT_06 (reference) CB_LVTIT_08 CB_LVTIT_10 CB_LVTIT_12 CB_RAW |
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Menisci Geometry
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oks001 |
oks002 |
oks003 |
oks004 |
oks006 |
oks007 |
oks008 |
oks009 |
MNS-M (medial) |
CB_LIT_06 (reference) CB_LIT_08 CB_LIT_10 CB_RAW TB_RAWTB_SMOOTHTB_LIT_06TB_LIT_08TB_LIT_10 |
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MNS-L (lateral) |
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Connective Tissues Geometry - Ligaments and Tendons
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oks001 |
oks002 |
oks003 |
oks004 |
oks006 |
oks007 |
oks008 |
oks009 |
ACL |
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MCL |
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PCL |
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LCL |
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PTL (patellar ligament) |
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QAT (quadriceps tendon) |
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Registration Markers Geometry
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oks001 |
oks002 |
oks003 |
oks004 |
oks006 |
oks007 |
oks008 |
oks009 |
FMR-L |
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FMR-M |
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FMR-P |
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PTR-L |
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PTR-M |
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PTR-S |
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TBR-L |
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TBR-M |
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TBR-P |
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Tissue Testing
Primary Tissues
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oks001 |
oks002 |
oks003 |
oks004 |
oks006 |
oks007 |
oks008 |
oks009 |
Medial Femoral Condyle |
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Lateral Femoral Condyle |
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Medial Tibial Plateau |
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Lateral Tibial Plateau |
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Trochlear Groove |
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Patella |
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Medial Meniscus |
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Lateral Meniscus |
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Anterior Cruciate Ligament |
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Posterior Cruciate Ligament |
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Lateral Collateral Ligament |
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Medial Collateral Ligament |
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Patellar Ligament |
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Quadriceps Tendon |
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Secondary Tissues
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oks001 |
oks002 |
oks003 |
oks004 |
oks006 |
oks007 |
oks008 |
oks009 |
Medial Capsule |
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Lateral Capsule |
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Medial Patellofemoral Ligament |
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Transverse Ligament |
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Joint Testing and Imaging
Links direct to download package, which includes both the joint testing and imaging files for each knee. For more information, see Downloads.
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Joint Testing |
✓ |
✓ |
✓ |
✓ |
✓ |
✓ |
✓ |
✓ |
Imaging |
✓ |
✓ |
✓ |
✓ |
✓ |
✓ |
✓ |
✓ |
Open Knee(s) Utilities
Versioning
Releases of Open Knee(s) utilities rely on the following version numbering scheme:
Version version.major.minor.revision
- version
- numbering based on goals of the roadmap
- major
- implementation of a new feature
- minor
- improvement of a feature or a bug fix
- revision
- revision number of the subversion repository on which the release is based on
For example, Open Knee(s) Utilities Version 1.0.4.346.
Roadmap
- Data collection tools
- Data processing tools
- Model development tools
- Simulation tools
- Post-processing tools
Infrastructure
Please also refer to the main Infrastructure page.
Specifications
Please also refer to the main Specifications page.