OpenSim

Provide easy-to-use, extensible software for
modeling, simulating, controlling, and analyzing
the neuromusculoskeletal system.
Downloads last week: 1,351
Forum posts last week: 6
Total followers: 318
Total downloads: 796,024

Validation of Subject-Specific Knee Models from In Vivo Measurements

Working models, data, code, and results for work
to validate that in vivo methods for measuring
laxity and obtaining knee geometry are comparable
to methods previously standard for knee modeling
of in vitro specimens.
New followers: 1

SimVascular: Examples and Clinical Cases

Download examples and clinical case files for
cardiovascular modeling and simulation compatible
with SimVascular
Downloads last week: 58
Total downloads: 14,376

Open Knee(s): Virtual Biomechanical Representations of the Knee Joint

Open Knee(s) goals have been to provide free
access to three-dimensional finite element
representations of the knee joint and promote open
development of knee models for collaborative
testing and use. <B>Definitive Guide to
Project and Its Outcomes</B> Open Knee(s): A
Free and Open Source Library of Specimen-Specific
Models and Related Digital Assets for Finite
Element Analysis of the Knee Joint. Chokhandre S,
Schwartz A, Klonowski E, Landis B, Erdemir A. Ann
Biomed Eng. 2023 Jan;51(1):10-23. (<A
HREF="https://doi.org/10.1007/s10439-022-0307
4-0">https://doi.org/10.1007/s10439-022-03
074-0</A>) <B>Definitive Guide to
Open Knee(s) Data</B> Specimen specific
imaging and joint mechanical testing data for next
generation virtual knees. Chokhandre S, Neumann
EE, Nagle TF, Colbrunn RW, Flask CA, Colak C,
Halloran J, Erdemir A. Data Brief. 2021 Jan
30;35:106824. (<A
HREF="https://doi.org/10.1016/j.dib.2021.1068
24">https://doi.org/10.1016/j.dib.2021.106
824</A>) <B>Database of Open
Knee(s) Models</B> Under Downloads ->
Data Share -> View -> OKS_models and at
(<A
HREF="https://doi.org/10.18735/b0zv-n395"
;>https://doi.org/10.18735/b0zv-n395</A>)
<B>Database of Open Knee(s)
Data</B> Growing version under Downloads
-> Data Share -> View -> Open Knees Data;
permanent static version at (<A
HREF="https://doi.org/10.18735/4e78-1311"
;>https://doi.org/10.18735/4e78-1311</A>)
Downloads last week: 285
Total followers: 47
Total downloads: 144,371

OpenSim Moco

OpenSim Moco solves optimal control problems with
musculoskeletal models defined in OpenSim, using
direct collocation.
Forum posts last week: 1

Snorkel

Snorkel is an open-source system that generates
training data for information extraction systems,
also known as predictive systems.
Downloads last week: 176
Total downloads: 45,537

Whole-Cell Computational Model of Mycoplasma genitalium

This project provides all code and data for the
first "whole-cell" model of the entire life cycle
of a living organism, Mycoplasma
genitalium.
Downloads last week: 3,390
Total downloads: 269,662

Closed loop simulation of a human-exoskeleton and kinetic and kinematic modeling

This project attempts to tackle some of the
challenges in developing an exoskeleton device
using simulation methods. in this project, the
closed loop simulation of a human exoskeleton is
performed .In this study, a simulation-based
method is presented for the designing and analysis
of the parameters of an exoskeleton and its
wearer’s kinetics and kinematics. Model-based
design software, including OpenSim and Inventor,
and mathematical software, such as MATLAB, are
integrated. This method can assist in the
modification of exoskeleton devices and allow
physiologists, and physical therapists to
generate new solutions for rehabilitation programs
using exoskeletons.
Downloads last week: 42

Model of the Scapulothoracic Joint

Provide an OpenSim Joint model that enables a more
accurate representation of scapula mechanics in
musculoskeletal simulations.
Total followers: 30
Total downloads: 10,476

Grand Challenge Competition to Design Stroke Neurorehabilitation Treatments

Provide comprehensive data sets with associated
models (scaled generic and personalized) that will
enable researchers to design personalized stroke
neurorehabilitation treatments.
New download files: 10

OpenMM Zephyr

OpenMM Zephyr provides a visual application for
running GPU-accelerated molecular simulations.
Downloads last week: 1,065
Total downloads: 1,110,000

Platform for Dynamic Simulation and Control of Movement based on OpenSim&MATLAB

This project overcomes neuromusculoskeletal
systems limitations of MATLAB®/Simulink® and
robust design & control limitations of OpenSim
through an interface between these two software
packages that combines relevant strengths of each
individual package.
Total followers: 73

Upper Extremity Dynamic Model

Provides the files associated with a dynamic model
of the upper limb for use in SIMM or OpenSim.
Total followers: 45
Total downloads: 9,993

OpenMM

OpenMM includes everything one needs to run modern
molecular simulations. It is extremely flexible
with its custom functions, is open-source, and has
high performance, especially on recent GPUs.
Downloads last week: 1,669
Total followers: 66
Total downloads: 817,567

SimVascular: Cardiovascular Modeling and Simulation

Provides a platform for patient-specific
cardiovascular modeling and simulation.
Downloads last week: 159
Forum posts last week: 9
Total followers: 79
Total downloads: 48,677