OpenMM

OpenMM includes everything one needs to run modern
molecular simulations. It is extremely flexible
with its custom functions, is open-source, and has
high performance, especially on recent GPUs.
Downloads last week: 2,810
Forum posts last week: 6
Total followers: 66
Total downloads: 812,917

OpenSim Moco

OpenSim Moco solves optimal control problems with
musculoskeletal models defined in OpenSim, using
direct collocation.
Forum posts last week: 8

Upper Extremity Dynamic Model

Provides the files associated with a dynamic model
of the upper limb for use in SIMM or OpenSim.
Total followers: 45
Total downloads: 9,903

SCONE: Open Source Software for Predictive Simulation

<img
src="https://scone.software/scone_window.png&
quot; alt="SCONE">SCONE is free and
open-source software for <b>predictive
simulation</b> of human and animal
motion. With SCONE, you can define and optimize
<b>neuromuscular controllers</b> to
optimally perform a specific task, according to
<b>high-level objectives</b> such as
walking speed and energy efficiency. Please
visit the <a
href="https://scone.software">SCONE
homepage</a> for more information, or check
<a
href="https://scone.software/doku.php?id=chan
ges">what's new</a> in the latest
version.
Forum posts last week: 3
Total followers: 34

Digital Astronaut Simulation

The Digital Astronaut Simulation (DAS) supports
applications in human spaceflight from
microgravity exploration exercise countermeasure
system development to lunar extravehicular
activity assessments.
https://nasa.gov/general/digital-astronaut-simulat
ion-tool/
New download files: 3
New followers: 3

OpenArm: Volumetric & Time Series Models of Muscle Deformation

The OpenArm data sets are designed to enable study
of force- and kinematic-induced muscle deformation
for applications in biomechanics research,
computer graphics, and assistive device
development. **NEW:** The OpenArm Multisensor
2.0 data set contains new time series of
ultrasound-measured brachioradialis deformation,
surface electromyography (sEMG)-measured
activation, force, and goal trajectory data, for
various force-, deformation-, and activation-based
trajectory tracking tasks, under refined
conditions from those of the 1.0 data set. Also
included are all analysis, real-time muscle
deformation tracking, and display code. The
OpenArm Multisensor 1.0 data set contains time
series cross-sectional ultrasound scans of the
brachioradialis muscle under variable elbow
loading, alongside corresponding surface
electromyography (sEMG), acoustic myography (AMG),
and force data. The OpenArm 1.0 and 2.0 data
sets encompass factorial sets of volumetric scans
of the arm, generated using ultrasound and motion
capture, that allow for analysis of both force-
and configuration-associated muscle deformation.
Downloads last week: 102
Total downloads: 14,748

Are subject-specific musculoskeletal models robust to parameter identification?

Analyze how robust are image-based musculoskeletal
models to the uncertainties in parameter
identification, and provide software for
subject-specific model creation (NMSBuilder) and
probabilistic simulations of movement.
Downloads last week: 45

Shoulder Joint Kinematics

Shoulder Joint COR tracking
Forum posts last week: 1

SimVascular: Cardiovascular Modeling and Simulation

Provides a platform for patient-specific
cardiovascular modeling and simulation.
Downloads last week: 156
Forum posts last week: 9
Total followers: 78
Total downloads: 48,028

SimVascular: Examples and Clinical Cases

Download examples and clinical case files for
cardiovascular modeling and simulation compatible
with SimVascular
Downloads last week: 58
Total downloads: 14,205

Dynamic Arm Simulator

Provides a real-time, dynamic simulation of arm
movement.
Total followers: 39

Snorkel

Snorkel is an open-source system that generates
training data for information extraction systems,
also known as predictive systems.
Downloads last week: 427
Total downloads: 44,963

Open Knee(s): Virtual Biomechanical Representations of the Knee Joint

Open Knee(s) goals have been to provide free
access to three-dimensional finite element
representations of the knee joint and promote open
development of knee models for collaborative
testing and use. <B>Definitive Guide to
Project and Its Outcomes</B> Open Knee(s): A
Free and Open Source Library of Specimen-Specific
Models and Related Digital Assets for Finite
Element Analysis of the Knee Joint. Chokhandre S,
Schwartz A, Klonowski E, Landis B, Erdemir A. Ann
Biomed Eng. 2023 Jan;51(1):10-23. (<A
HREF="https://doi.org/10.1007/s10439-022-0307
4-0">https://doi.org/10.1007/s10439-022-03
074-0</A>) <B>Definitive Guide to
Open Knee(s) Data</B> Specimen specific
imaging and joint mechanical testing data for next
generation virtual knees. Chokhandre S, Neumann
EE, Nagle TF, Colbrunn RW, Flask CA, Colak C,
Halloran J, Erdemir A. Data Brief. 2021 Jan
30;35:106824. (<A
HREF="https://doi.org/10.1016/j.dib.2021.1068
24">https://doi.org/10.1016/j.dib.2021.106
824</A>) <B>Database of Open
Knee(s) Models</B> Under Downloads ->
Data Share -> View -> OKS_models and at
(<A
HREF="https://doi.org/10.18735/b0zv-n395"
;>https://doi.org/10.18735/b0zv-n395</A>)
<B>Database of Open Knee(s)
Data</B> Growing version under Downloads
-> Data Share -> View -> Open Knees Data;
permanent static version at (<A
HREF="https://doi.org/10.18735/4e78-1311"
;>https://doi.org/10.18735/4e78-1311</A>)
Downloads last week: 399
Total followers: 47
Total downloads: 143,570

Thoracolumbar spine and rib cage model in OpenSim

The aim of this project is to provide detailed and
well-validated musculoskeletal models of the
thoracolumbar spine and rib cage, particularly for
investigators with an interest studying
musculoskeletal loading in the trunk.
Total followers: 39

OpenMM Zephyr

OpenMM Zephyr provides a visual application for
running GPU-accelerated molecular simulations.
Downloads last week: 577
Total downloads: 1,107,082