OpenMM

OpenMM includes everything one needs to run modern
molecular simulations. It is extremely flexible
with its custom functions, is open-source, and has
high performance, especially on recent GPUs.
Downloads last week: 1,845
Forum posts last week: 2
Total followers: 66
Total downloads: 821,816

Matlab-Opensim Interfaces

Provides tools for using different aspects of
Opensim within the Matlab environment, including
command line pipelines as well as accessing the
Opensim API directly. The main functionality
has now been included as part of Opensim 3.0 with
improved functionality (and will become more
obsolete with Opensim 4.0). Please see the
developer wiki for more information. Therefore
this is being kept only as an archive, and users
should see the documentation on interfacing Matlab
with Opensim on the Opensim website
(http://simtk-confluence.stanford.edu:8080/display
/OpenSim/Scripting+with+Matlab). As such the
forums etc will not be monitored.
New followers: 1

Full Body Model for use in Dynamic Simulations of Human Gait

Full body musculoskeletal model with
muscle-actuated lower extremity and
torque-actuated torso/upper extremity for use in
dynamic simulations of human movement.
Downloads last week: 38
Total followers: 35
Total downloads: 13,402

Calibrated EMG-Informed Neuromusculoskeletal Modelling Toolbox (CEINMS)

Provides an easy to use toolbox, compatible with
OpenSim, for the estimation of the human lower
extremity muscle and joint dynamics.
Total followers: 41

MATLAB-based framework for implementing mechanical joint stability within SO

In this project, we developed a MATLAB-based
framework for OpenSim to calculate muscle
activations and forces that also satisfy
mechanical stability requirements.
New followers: 1

Rapid energy expenditure estimation for assisted and inclined loaded walking

This project aims to estimate energy expenditure
during ankle assisted and inclined loaded walking
from wearable sensor signals. In this work we
trained models using input features of muscle
activity (EMG) and ground reaction forces to
estimate energy exp
Forum posts last week: 1

Multi-segment Foot and ankle model validated using biplanar videoradiography

A multi-segment foot and ankle model consisting of
the tibia, talus, calcaneus, midfoot, forefoot and
toes, with a total of 7 degrees of freedom. Motion
between segments were constrained such that all
joints except for the ankle were modelled as a
revolut
Downloads last week: 63

OpenSim Moco

OpenSim Moco solves optimal control problems with
musculoskeletal models defined in OpenSim, using
direct collocation.
Forum posts last week: 2

Upper Extremity Kinematic Model

Upper-extremity available for download along with
accompanying publications.
Total followers: 27
Total downloads: 11,039

Reproducibility in simulation­-based prediction of natural knee mechanics

This project aims for understanding the influence
of modelers’ approaches and decisions
(essentially their art) throughout the lifecycle
of modeling and simulation. It will demonstrate
the uncertainty of delivering consistent
simulation predictions when the founding data to
feed into models remain the same. The project site
also aims to be a hub to provide an overview of
resources for modeling & simulation of the knee
joint. Funding is provided by the National
Institute of Biomedical Imaging and
Bioengineering, National Institutes of Health
(Grant No. R01EB024573).
Downloads last week: 77
Total downloads: 27,168

Model of the Scapulothoracic Joint

Provide an OpenSim Joint model that enables a more
accurate representation of scapula mechanics in
musculoskeletal simulations.
Total followers: 30
Total downloads: 10,523

Whole-Cell Computational Model of Mycoplasma genitalium

This project provides all code and data for the
first "whole-cell" model of the entire life cycle
of a living organism, Mycoplasma
genitalium.
Downloads last week: 1,831
Total downloads: 273,918

2007BioE15 Bruns

Submit materials for class
Total followers: 79

Ski Analysis

differences between retraction and extension
turns - joint angles - muscle stretch shortening
cycle- lengths for each turn
Forum posts last week: 1

SimTK Website

Provide updates about the SimTK website and
support its users
Forum posts last week: 2