Uses of Interface
org.simtk.molecularstructure.SecondaryStructure

Packages that use SecondaryStructure

org.simtk.molecularstructure
org.simtk.molecularstructure.nucleicacid
org.simtk.molecularstructure.protein

Uses of SecondaryStructure in org.simtk.molecularstructure

Classes in org.simtk.molecularstructure that implement SecondaryStructure

class

SecondaryStructureClass

Methods in org.simtk.molecularstructure that return types with arguments of type SecondaryStructure

java.util.Set<SecondaryStructure>	BiopolymerClass.displayableStructures()
java.util.Collection<SecondaryStructure>	ResidueClass.secondaryStructures()
java.util.Collection<SecondaryStructure>	Residue.secondaryStructures()
java.util.Set<SecondaryStructure>	BiopolymerClass.secondaryStructures()
java.util.Set<SecondaryStructure>	Biopolymer.secondaryStructures()

Methods in org.simtk.molecularstructure with parameters of type SecondaryStructure

void	BiopolymerClass.addSecondaryStructure(SecondaryStructure ss)

Uses of SecondaryStructure in org.simtk.molecularstructure.nucleicacid

Classes in org.simtk.molecularstructure.nucleicacid that implement SecondaryStructure

class	BasePair
class	BaseStack
class	BaseTriple
class	Duplex
class	Pseudoknot

Uses of SecondaryStructure in org.simtk.molecularstructure.protein

Classes in org.simtk.molecularstructure.protein that implement SecondaryStructure

class	BetaStrand
class	Helix