Myosin

Computational methods are providing new insights into our understanding of myosin, a motor protein critical for muscle contractions.

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News

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OpenSim gets high marks as a multibody system simulator

Simbody: Multibody Physics API Aug 3, 2015
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Macromolecular Simulation Software Workshop featuring OpenMM

OpenMM Jul 15, 2015
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OpenMM 6.1 Available

OpenMM Sep 30, 2014

Publications

David A. Sivak, John D. Chodera, and Gavin E. Crooks. Phys. Rev. X 3, 011007

P. Eastman, M. S. Friedrichs, J. D. Chodera, R. J. Radmer, C. M. Bruns, J. P. Ku, K. A. Beauchamp, T. J. Lane, L.-P. Wang, D. Shukla, T. Tye, M. Houston, T. Stich, C. Klein, M. R. Shirts, and V. S. Pande. "OpenMM 4: A Reusable, Extensible, Hardware Independent Library for High Performance Molecular Simulation." J. Chem. Theor. Comput. 9(1):461-469.

M. Senne, B. Trendelkamp-Schroer, A.S.J.S. Mey, C. Schütte, F. Noe: "EMMA - A software package for Markov model building and analysis". J. Chem. Theo. Comput 2012, 8 (7), pp 2223–2238 DOI: 10.1021/ct300274u

Discussion

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Re: What is the best way to fix the coordinate of a set of atoms?

OpenMM Jun 26, 2017
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Re: Asymmetrical Passing

OpenMM Jun 26, 2017
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Re: Error when retrieving a State from RPMDIntegrator?

OpenMM Jun 23, 2017

SimTK is maintained through Grant R01 GM107340 from the National Institutes of Health (NIH). It was initially developed as part of the Simbios project funded by the NIH as part of the NIH Roadmap for Medical Research, Grant U54 GM072970.

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