Myosin

Computational methods are providing new insights into our understanding of myosin, a motor protein critical for muscle contractions.

Recently updated projects

total
projects
26
projects with
downloads

News

Image not available

OpenSim gets high marks as a multibody system simulator

Simbody: Multibody Physics API Aug 3, 2015
Image not available

Macromolecular Simulation Software Workshop featuring OpenMM

OpenMM Jul 15, 2015
Image not available

OpenMM 6.1 Available

OpenMM Sep 30, 2014

Publications

David A. Sivak, John D. Chodera, and Gavin E. Crooks. Phys. Rev. X 3, 011007

P. Eastman, M. S. Friedrichs, J. D. Chodera, R. J. Radmer, C. M. Bruns, J. P. Ku, K. A. Beauchamp, T. J. Lane, L.-P. Wang, D. Shukla, T. Tye, M. Houston, T. Stich, C. Klein, M. R. Shirts, and V. S. Pande. "OpenMM 4: A Reusable, Extensible, Hardware Independent Library for High Performance Molecular Simulation." J. Chem. Theor. Comput. 9(1):461-469.

M. Senne, B. Trendelkamp-Schroer, A.S.J.S. Mey, C. Schütte, F. Noe: "EMMA - A software package for Markov model building and analysis". J. Chem. Theo. Comput 2012, 8 (7), pp 2223–2238 DOI: 10.1021/ct300274u

Discussion

Image not available

Re: worm-like chain torsion

OpenMM Aug 18, 2017
Image not available

Re: Density-dependent potential

OpenMM Aug 18, 2017
Image not available

Re: Custom (improper) torsion, choice of function and order of atoms

OpenMM Aug 18, 2017

SimTK is maintained through Grant R01 GM107340 from the National Institutes of Health (NIH). It was initially developed as part of the Simbios project funded by the NIH as part of the NIH Roadmap for Medical Research, Grant U54 GM072970.

Our Pledge and Your Responsibility

  About   Join
Version 2.0.17. Website design by Viewfarm. Icons created by SimTK team using art by GraphBerry from www.flaticon.com under a CC BY 3.0 license. Forked from FusionForge 5.3.2.
Feedback