Physics-Based Simulation

Physics and computation are a powerful combination used to understand biological form and function to create novel drugs, synthetic tissues, medical devices, and surgical interventions

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News

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Workshop at SB3C Conference June 13, 2021

SimVascular: Cardiovascular Modeling and Simulation Jun 7, 2021
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Dog model

A three-dimensional musculoskeletal model of the dog May 31, 2021
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Apply for Digital Human Modeling Postdoctoral Fellowships at Stanford University

OpenSim Jan 23, 2021

Publications

SBMOpenMM: A Builder of Structure-Based Models for OpenMM

Christopher L Dembia, Nicholas A Bianco, Antoine Falisse, Jennifer L Hicks, Scott L Delp. OpenSim Moco: Musculoskeletal optimal control. PLoS Computational Biology; doi: https://doi.org/10.1371/journal.pcbi.1008493

Stark H, Fischer MS, Hunt A, Young F, Quinn R & Andrada E (2020) A three-dimensional musculoskeletal model of the dog. BioRxiv:2020.07.16.205856; DOI:10.1101/2020.07.16.205856

Discussion

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Modeller for multivalent ions?

OpenMM Dec 1, 2021
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Re: DeGrooteFregly2016 muscle in CMC

OpenSim Moco Nov 30, 2021
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Re: Extracting data using element ID from .vtu file

SimVascular: Cardiovascular Modeling and Simulation Application Nov 30, 2021

SimTK is maintained through Grant R01GM124443 01A1 from the National Institutes of Health (NIH). It was initially developed as part of the Simbios project funded by the NIH as part of the NIH Roadmap for Medical Research, Grant U54 GM072970.

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