Processing biological images – whether from traditional microscopy, x-rays, and MRIs, or newer experimental techniques such as microarrays -- aids in their interpretation and use by other software.
Recently updated projects
Updegrove, A., Wilson, N.M., Merkow, J., Lan, H., Marsden, A.L., Shadden, S. C., “SimVascular - An Open Source Pipeline for Cardiovascular Simulation,” Annals of Biomedical Engineering, Vol 45 (3), pp. 525-541
Y. Pauchard, T. Fitze, D. Browarnik, A. Eskandari, W. Enns-Bray, H. Pálsson, S. Sigurdsson, Stephen J. Ferguson, Tamara B. Harris, V. Gudnason and B. Helgason. "Interactive Graph-Cut Segmentation for Fast Creation of Finite Element Models from Clinical CT Data for Hip Fracture Prediction." Computer Methods in Biomechanics and Biomedical Engineering vol. 19(16):1693-1703.