Calcium 2015 distribution files.
This release is for users who need the Ca++ binding model; new FEATURE users should download and use FEATURE 3.0 instead. Click the links below to download the FEATURE 1.9 source code for UNIX, Linux, Mac OS X, Windows/CYGWIN systems. This package also includes Ca++ binding model ca.model, originally released in 2007.
[FEATURE Framework] ********** "The FEATURE framework for protein function annotation: modeling new functions, improving performance, and extending to novel applications." Halperin I, Glazer DS, Wu S, Altman RB. BMC Genomics. 9 Suppl 2 S2. (2008) View
[SeqFEATURE Models] ********** "The SeqFEATURE library of 3D functional site models: comparison to existing methods and applications to protein function annotation." Wu S, Liang MP, Altman RB. Genome Biol. 9 (1): R8. (2008) View
[RNA_DiffBndMg & RNA_SiteBndMg Models] ********** "Microenvironment analysis and identification of magnesium binding sites in RNA." Banatao DR, Altman RB, Klein TE. Nucleic Acids Res. 31(15): 4450-60. (2003) View
[ATP, Calcium & Chloride Models] ********** "Recognizing protein binding sites using statistical descriptions of their 3D environments." Wei L, Altman RB. Pac Symp Biocomput. 497-508. (1998) View