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GeneDive v3.1
GeneDive is a powerful but easy-to-use application that can search, sort, group, filter, highlight, and visualize interactions between drugs, genes, and diseases (DGR). GeneDive also facilitates topology discovery through the various search modes that reveal direct and indirect interactions between DGR. The search results, in textual and graphical form, can be downloaded along with the search settings to easily restart the session at later time. Refer to Wong et al. 2021 for more details.
RC1 (4 files totaling 1.8 GB)
Sep 29, 2021

Release Candidate 1 comprised of: (1) GeneDive v3.1 Docker Image; (2) Native Datasource; (3) Installation instructions; and (4) MD5 checksum for data integrity verification. The first 3 files are required to run GeneDive v3.1; the MD5 checksum is optional.  View License

Download Links

Feb 23, 2022
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GeneDive v3.1 Docker Image MD5 checksum

Feb 22, 2022
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GeneDive v3.1 Docker Image Installation Instructions

Feb 23, 2022
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GeneDive v3.1 Native Datasource (Mallory et al 2016) and instructions to run GeneDive v3.1 Docker Image

Feb 22, 2022
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GeneDive v3.1 Docker Image


Import PharmGKB to GeneDive
Script and instructions to import PharmGKB relationships data into GeneDive v3.1
PharmGKB ETL Script
Feb 25, 2022

Scripts to import PharmGKB relationships data into GeneDive v3.1  View License

Download Links

Feb 25, 2022
6 KB
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After downloading and unzipping the compressed file, see the README.md for further instructions. You will need the GeneDive v3.1 Docker Image, GeneDive v3.1 Docker Image Installation Instructions, and the GeneDive v3.1 native datasource packages.


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