Code to solve trajectory optimization problems with OpenSim, direct collocation, and algorithmic differentiation .
This repository contains code and data to generate OpenSim-based trajectory optimization of human movement while exploiting algorithmic differentiation (AD) as described in: Falisse A, Serrancoli G, Dembia C, Gillis J, De Groote F, (2019). Algorithmic differentiation improves the computational efficiency of OpenSim-based trajectory optimization of human movement. PLoS ONE 14(10): e0217730, https://doi.org/10.1371/journal.pone.0217730.
We enabled the use of AD in OpenSim through a custom source code transformation tool named Recorder and through the operator overloading tool ADOL-C. For this purpose, we modified the source code of OpenSim and Simbody (https://github.com/antoinefalisse/opensim-core/tree/AD-recorder).
We then developed an interface between OpenSim and CasADi to solve trajectory optimization problems. CasADi is a tool for nonlinear optimization and algorithmic differentiation.
We compared the computational efficiency of using standard finite differences (FD) versus AD, implemented through Recorder (AD-Recorder) and ADOL-C (AD-ADOLC), when solving a series of trajectory optimization problems. These problems consisted of simulations of perturbed balance, two-dimensional predictive simulations of walking, and three-dimensional tracking simulations of walking. We found that using AD through Recorder was between 1.8 ± 0.1 and 17.8 ± 4.9 times faster than using FD, and between 3.6 ± 0.3 and 12.3 ± 1.3 times faster than using AD through ADOL-C. The larger the problem the larger the computational benefit of using AD instead of FD.
In this repository, we provide code necessary to perform the simulations with AD-Recorder and FD. We also provide code for analyzing the results and reproducing the figures presented in the associated paper.
This repository is actively maintained on GitHub: https://github.com/antoinefalisse/algodiff
Thanks for citing our work in any derived publication. Feel free to reach us for any questions: firstname.lastname@example.org | email@example.com | firstname.lastname@example.org | email@example.com.
This code has been developed on Windows using MATLAB2017b. There is no guarantee that it runs smooth on other platforms. Please let us know if you run into troubles.
The repository has been split into three parts to meet the file size requirements. Make sure you reconstruct the full repository as described in the README.