All Classes

ActiveMoleculeBroadcaster ActiveMoleculeListener ActorCartoon ActorCartoonClass Adenylate Alanine AminoAcid Angle Angle.Range Angle.Units Arginine Asparagine Aspartate Atom AtomClass AtomColorScheme AtomPosition AtomSet AtomSphereActor AtomSpheres BackboneCurve BackboneStick BackboneTubeActor BackboneTubeCartoon BallAndStickCartoon BaseCartoon BaseConnectorTube BaseConnectorTubeActor BasePair BasePair.BondOrientation BasePair.EdgeType BasePairBrick BasePairConnectorStick BasePairOval BasePairPosition BasePairRibbon BasePairRod BasePosition BaseStack BaseTriple BetaStrand BetaStrandRibbon Biopolymer BiopolymerClass BondStickCartoon BoundingBox BufferedCanvas CameraPanel CappedBondActor Chemical ChemicalElement ChemicalElementClass CholeskyDecomposition ColorName ColorScheme CommandLineInterface CompositeCartoon ConstantColor Cylinder CylinderCartoon CylinderPanel Cysteine Cytidylate DefaultColorScheme DNA DoubleRing Duplex DuplexCylinderActor DuplexCylinderCartoon DuplexResidueWedge EigenvalueDecomposition EthaneDemo EthaneSplasher FileNameFilter FineRibbonCartoon FunctionalGroup Glutamate Glutamine Glycine GlyphCartoon GraphicsCylinder Guanylate Hairpin Hash3D Helix Hidable HidableActorClass HighlightColorScheme Histidine HomogeneousTransform HomogeneousTransformClass InertialRotationThread Inositate InsufficientAtomsException InsufficientPointsException Isoleucine JamaMatrix JLinkLabel Leucine Line3D LineCommand LoadPdbUrlProcess LocatedProtein Location LUDecomposition Lysine MagicSquareExample MassBody MassBodyClass MathMatrix MathMatrixClass Maths MathVector MathVectorClass Matrix Matrix3D Matrix3DClass MatrixSizeMismatchException Methionine MolApp Molecular MolecularClass Molecule MoleculeAcquisitionMethodDialog MoleculeBlobActor MoleculeBlobs MoleculeCartoon MoleculeCartoonClass MoleculeClass MoleculeCollection MoleculeColorScheme MoleculeMVCModel MoleculeTensorActor MoleculeTensorCartoon MonitoredProcess MutableHomogeneousTransform MutableMathMatrix MutableMathVector MutableMatrix3D MutableVector2D MutableVector3D MVCModel MVCView MyJFileFilter NewBackboneCurveActor NewDuplexCylinderActor NoCartoonCreatedException NucleicAcid Nucleotide NucleotideStickCartoon NumberTick NussinovDiagram ObservableInterface ParameterSetModel PDBProteinClass Phenylalanine Plane3D ProgrammerLogicProblem ProgressDialog ProgressDialogClass ProgressManager ProgressPanel Proline Protein ProteinCoil ProteinHelix ProteinRibbon ProteinRibbonSegment ProteinRibbonSphereTest Pseudoknot PublicNativeVtkPanel Purine Pyrimidine QRDecomposition Residue ResidueCenterBroadcaster ResidueCenterListener ResidueClass ResidueHighlightBroadcaster ResidueHighlightListener ResidueSphereActor ResidueSpheres ResidueType ResidueTypeClass RichardsonProteinRibbon RNA RnamlDocument RnamlExportDocument RopeAndCylinder ScaleBar SecondaryStructure SecondaryStructureCanvas SecondaryStructureClass SecondaryStructureClass.SourceType SecondaryStructureDiagram SecondaryStructureDiagramClass Selectable SelectionBroadcaster SelectionListener SemiCylinder SequenceAlignment SequenceCanvas SequenceCartoonCanvas SequencePane SequencingNucleotideColorScheme Serine SimpleObservable SingularValueDecomposition SplashWindow Spline3D Stopwatch StructureCanvas Superposition TensorGlyphCartoon TestArrowRibbon TestKabschSuperposition TestMatrix TestMenu TestSecondaryStructureCanvas TestSuperposition TestVector3DClass Threonine Throbber Thymidylate ToonColors Tornado Tornado3DCanvas TornadoSequenceCanvas TornadoSplasher Tryptophan TubeAndStickTrace Tyrosine UncompressInputStream UndoableDialog UndoRedoMechanism UnknownAminoAcid UnknownObjectColorException Uridylate Valine Vector2D Vector2DClass Vector3D Vector3DClass Vector3DFloatArrayWrapper VectorSizeException vtkArrowWidthFilter vtkGrowPointsFilter VTKLibraries vtkPreExtrusionCenteringFilter vtkRoundScalarsFilter vtkSetScalarsFilter vtkSwingPanel vtkTaperedWidthFilter WebPDB WireFrame WireFrameActor