#include <Storage.h>

Inheritance diagram for OpenSim::Storage:

Public Member Functions
	Storage (int aCapacity=Storage_DEFAULT_CAPACITY, const std::string &aName="UNKNOWN")

	Storage (const std::string &aFileName, bool readHeadersOnly=false) SWIG_DECLARE_EXCEPTION

	Storage (const Storage &aStorage, bool aCopyData=true)

	Storage (const Storage &aStorage, int aStateIndex, int aN, const char *aDelimiter="\t")

virtual	~Storage ()

Storage &	operator= (const Storage &aStorage)
	Assignment operator to copy contents of an existing storage. More...

const std::string &	getName () const

const std::string &	getDescription () const

void	setName (const std::string &aName)

void	setDescription (const std::string &aDescription)

const int &	getFileVersion () const

virtual int	getSize () const

int	getSmallestNumberOfStates () const

virtual StateVector *	getStateVector (int aTimeIndex) const

virtual StateVector *	getLastStateVector () const

virtual double	getFirstTime () const

virtual double	getLastTime () const

double	getMinTimeStep () const

bool	getTime (int aTimeIndex, double &rTime, int aStateIndex=-1) const

virtual int	getTimeColumn (double *&rTimes, int aStateIndex=-1) const

virtual int	getTimeColumn (Array< double > &rTimes, int aStateIndex=-1) const

virtual void	getTimeColumnWithStartTime (Array< double > &rTimes, double startTime=0.0) const

void	addKeyValuePair (const std::string &aKey, const std::string &aValue)

void	getValueForKey (const std::string &aKey, std::string &rValue) const

bool	hasKey (const std::string &aKey) const

const bool	isInDegrees () const

void	setInDegrees (const bool isInDegrees)

int	getData (int aTimeIndex, int aStateIndex, double &rValue) const

int	getData (int aTimeIndex, int aStateIndex, int aN, double **rData) const

int	getData (int aTimeIndex, int aStateIndex, int aN, double *rData) const

int	getData (int aTimeIndex, int aN, double **rData) const

int	getData (int aTimeIndex, int aN, double *rData) const

int	getData (int aTimeIndex, int aN, Array< double > &rData) const

int	getData (int aTimeIndex, int aN, SimTK::Vector &v) const

int	getDataAtTime (double aTime, int aN, double **rData) const

int	getDataAtTime (double aTime, int aN, double *rData) const

int	getDataAtTime (double aTime, int aN, Array< double > &rData) const

int	getDataAtTime (double aTime, int aN, SimTK::Vector &v) const

int	getDataColumn (int aStateIndex, double *&rData) const

int	getDataColumn (int aStateIndex, Array< double > &rData) const

void	setDataColumnToFixedValue (const std::string &columnName, double newValue)

void	setDataColumn (int aStateIndex, const Array< double > &aData)

int	getDataColumn (const std::string &columnName, double *&rData) const

void	getDataColumn (const std::string &columnName, Array< double > &data, double startTime=0.0)

void	getDataForIdentifier (const std::string &identifier, Array< Array< double > > &rData, double startTime=0.0) const
	A data block, like a vector for a force, point, etc... More...

OpenSim::Array< int >	getColumnIndicesForIdentifier (const std::string &identifier) const
	Get indices of columns corresponding to identifier, empty array if identifier is not found in labels. More...

void	setStepInterval (int aStepInterval)

int	getStepInterval () const

void	setCapacityIncrement (int aIncrement)

int	getCapacityIncrement () const

void	setWriteSIMMHeader (bool aTrueFalse)

bool	getWriteSIMMHeader () const

void	setHeaderToken (const std::string &aToken)

const std::string &	getHeaderToken () const

const int	getStateIndex (const std::string &aColumnName, int startIndex=0) const

void	setColumnLabels (const Array< std::string > &aColumnLabels)

const Array< std::string > &	getColumnLabels () const

int	reset (int aIndex=0)

int	reset (double aTime)

void	purge ()

void	crop (const double newStartTime, const double newFinalTime)

virtual int	append (const StateVector &aVec, bool aCheckForDuplicateTime=true)

virtual int	append (const Array< StateVector > &aArray)

virtual int	append (double aT, int aN, const double *aY, bool aCheckForDuplicateTime=true)

virtual int	append (double aT, const SimTK::Vector &aY, bool aCheckForDuplicateTime=true)

virtual int	append (double aT, const Array< double > &aY, bool aCheckForDuplicateTime=true)

virtual int	append (double aT, const SimTK::Vec3 &aY, bool aCheckForDuplicateTime=true)

virtual int	store (int aStep, double aT, int aN, const double *aY)

void	shiftTime (double aValue)

void	scaleTime (double aValue)

void	add (double aValue)

void	add (int aN, double aY[])

void	add (int aN, double aValue)

void	add (StateVector *aStateVector)

void	add (Storage *aStorage)

void	subtract (double aValue)

void	subtract (int aN, double aY[])

void	subtract (StateVector *aStateVector)

void	subtract (Storage *aStorage)

void	multiply (double aValue)

void	multiplyColumn (int aIndex, double aValue)

void	multiply (int aN, double aY[])

void	multiply (StateVector *aStateVector)

void	multiply (Storage *aStorage)

void	divide (double aValue)

void	divide (int aN, double aY[])

void	divide (StateVector *aStateVector)

void	divide (Storage *aStorage)

Storage *	integrate (int aI1=-2, int aI2=-1) const

Storage *	integrate (double aT1, double aT2) const

int	computeArea (int aN, double *aArea) const

int	computeArea (double aTI, double aTF, int aN, double *aArea) const

int	computeAverage (int aN, double *aAve) const

int	computeAverage (double aTI, double aTF, int aN, double *aAve) const

void	pad (int aPadSize)

void	smoothSpline (int aOrder, double aCutoffFrequency)

void	lowpassIIR (double aCutoffFequency)

void	lowpassFIR (int aOrder, double aCutoffFequency)

void	addToRdStorage (Storage &rStorage, double aStartTime, double aEndTime)

virtual int	findIndex (double aT) const

virtual int	findIndex (int aI, double aT) const

void	findFrameRange (double aStartTime, double aEndTime, int &oStartFrame, int &oEndFrame) const

double	resample (double aDT, int aDegree)

double	resampleLinear (double aDT)

double	compareColumn (Storage &aOtherStorage, const std::string &aColumnName, double startTime, double endTime=-1.0)

double	compareColumnRMS (Storage &aOtherStorage, const std::string &aColumnName, double startTime=SimTK::NaN, double endTime=SimTK::NaN)

void	compareWithStandard (Storage &standard, Array< std::string > &columnsUsed, Array< double > &comparisons)

bool	makeStorageLabelsUnique ()

bool	print (const std::string &aFileName, const std::string &aMode="w", const std::string &aComment="") const

int	print (const std::string &aFileName, double aDT, const std::string &aMode="w") const

void	setOutputFileName (const std::string &aFileName)

void	interpolateAt (const Array< double > &targetTimes)

Public Member Functions inherited from OpenSim::StorageInterface
	StorageInterface (const std::string &aFileName) SWIG_DECLARE_EXCEPTION

	StorageInterface (const StorageInterface &aStorageInterface)

virtual	~StorageInterface ()

StorageInterface &	operator= (const StorageInterface &aStorageInterface)

Public Member Functions inherited from OpenSim::Object
virtual	~Object ()
	Virtual destructor for cleanup. More...

virtual Object *	clone () const =0
	Create a new heap-allocated copy of the concrete object to which this Object refers. More...

virtual const std::string &	getConcreteClassName () const =0
	Returns the class name of the concrete Object-derived class of the actual object referenced by this Object, as a string. More...

virtual const VisibleObject *	getDisplayer () const
	Methods to support making the object displayable in the GUI or Visualizer Implemented only in few objects. More...

virtual VisibleObject *	updDisplayer ()
	get Non const pointer to VisibleObject More...

bool	isEqualTo (const Object &aObject) const
	Equality operator wrapper for use from languages not supporting operator overloading. More...

Object &	operator= (const Object &aObject)
	Copy assignment copies he base class fields, including the properties. More...

virtual bool	operator== (const Object &aObject) const
	Determine if two objects are equal. More...

virtual bool	operator< (const Object &aObject) const
	Provide an ordering for objects so they can be put in sorted containers. More...

void	setName (const std::string &name)
	Set the name of the Object. More...

const std::string &	getName () const
	Get the name of this Object. More...

void	setDescription (const std::string &description)
	Set description, a one-liner summary. More...

const std::string &	getDescription () const
	Get description, a one-liner summary. More...

const std::string &	getAuthors () const
	Get Authors of this Object. More...

void	setAuthors (const std::string &authors)
	Set Authors of this object, call this method in your constructor if needed. More...

const std::string &	getReferences () const
	Get references or publications to cite if using this object. More...

void	setReferences (const std::string &references)
	Set references or publications to cite if using this object. More...

int	getNumProperties () const
	Determine how many properties are stored with this Object. More...

const AbstractProperty &	getPropertyByIndex (int propertyIndex) const
	Get a const reference to a property by its index number, returned as an AbstractProperty. More...

AbstractProperty &	updPropertyByIndex (int propertyIndex)
	Get a writable reference to a property by its index number, returned as an AbstractProperty. More...

bool	hasProperty (const std::string &name) const
	Return true if this Object has a property of any type with the given name, which must not be empty. More...

const AbstractProperty &	getPropertyByName (const std::string &name) const
	Get a const reference to a property by its name, returned as an AbstractProperty. More...

AbstractProperty &	updPropertyByName (const std::string &name)
	Get a writable reference to a property by its name, returned as an AbstractProperty. More...

template<class T >
bool	hasProperty () const
	Return true if this Object contains an unnamed, one-object property that contains objects of the given template type T. More...

template<class T >
const Property< T > &	getProperty (const PropertyIndex &index) const
	Get property of known type Property<T> as a const reference; the property must be present and have the right type. More...

template<class T >
Property< T > &	updProperty (const PropertyIndex &index)
	Get property of known type Property<T> as a writable reference; the property must be present and have the right type. More...

void	setObjectIsUpToDateWithProperties ()
	When an object is initialized using the current values of its properties, it can set a flag indicating that it is up to date. More...

bool	isObjectUpToDateWithProperties () const
	Returns `true` if no property's value has changed since the last time setObjectIsUpToDateWithProperties() was called. More...

void	readObjectFromXMLNodeOrFile (SimTK::Xml::Element &objectElement, int versionNumber)
	We're given an XML element from which we are to populate this Object. More...

virtual void	updateFromXMLNode (SimTK::Xml::Element &objectElement, int versionNumber)
	Use this method to deserialize an object from a SimTK::Xml::Element. More...

virtual void	updateXMLNode (SimTK::Xml::Element &parent)
	Serialize this object into the XML node that represents it. More...

bool	getInlined () const
	Inlined means an in-memory Object that is not associated with an XMLDocument. More...

void	setInlined (bool aInlined, const std::string &aFileName="")
	Mark this as inlined or not and optionally provide a file name to associate with the new XMLDocument for the non-inline case. More...

std::string	getDocumentFileName () const
	If there is a document associated with this object then return the file name maintained by the document. More...

void	setAllPropertiesUseDefault (bool aUseDefault)

bool	print (const std::string &fileName)
	Write this Object into an XML file of the given name; conventionally the suffix to use is ".osim". More...

std::string	dump (bool dumpName=false)
	dump the XML representation of this Object into an std::string and return it. More...

void	clearObjectIsUpToDateWithProperties ()
	For testing or debugging purposes, manually clear the "object is up to date with respect to properties" flag. More...

virtual bool	isA (const char *type) const
	The default implementation returns true only if the supplied string is "Object"; each Object-derived class overrides this to match its own class name. More...

const std::string &	toString () const
	Wrapper to be used on Java side to display objects in tree; this returns just the object's name. More...

PropertySet &	getPropertySet ()
	OBSOLETE: Get a reference to the PropertySet maintained by the Object. More...

const PropertySet &	getPropertySet () const

Static Public Member Functions
static const int &	getLatestVersion ()

static void	printResult (const Storage *aStorage, const std::string &aName, const std::string &aDir, double aDT, const std::string &aExtension)

Static Public Attributes
static const char *	DEFAULT_HEADER_TOKEN
	Default token used to mark the end of the storage description in a file. More...

static const char *	DEFAULT_HEADER_SEPARATOR

static const int	MAX_RESAMPLE_SIZE

Protected Attributes
Array< StateVector >	_storage
	Array of StateVectors. More...

std::string	_headerToken
	Token used to mark the end of the description in a file. More...

Array< std::string >	_columnLabels
	Column labels. More...

int	_stepInterval
	Step interval at which states in a simulation are stored. More...

int	_lastI
	Last index at which a search was started. More...

bool	_writeSIMMHeader
	Flag for whether or not to insert a SIMM style header. More...

Units	_units
	Units in which the data is represented. More...

bool	_inDegrees
	Are angles, if any, specified in radians or degrees? More...

MapKeysToValues	_keyValueMap
	Map between keys in file header and values. More...

std::string	_fileName
	Cache for fileName and file pointer when the file is opened so we can flush and write intermediate files if needed. More...

FILE *	_fp

std::string	_name
	Name and Description. More...

std::string	_description

int	_fileVersion
	Storage file version as written to the file. More...

Static Protected Attributes
static std::string	simmReservedKeys []

static const int	LatestVersion

Additional Inherited Members
Protected Member Functions inherited from OpenSim::Object
	Object ()
	The default constructor is only for use by constructors of derived types. More...

	Object (const std::string &fileName, bool aUpdateFromXMLNode=true) SWIG_DECLARE_EXCEPTION
	Constructor from a file, to be called from other constructors that take a file as input. More...

	Object (const Object &source)
	Copy constructor is invoked automatically by derived classes with default copy constructors; otherwise it must be invoked explicitly. More...

	Object (SimTK::Xml::Element &aElement)
	Construct the base class portion of an Object from a given Xml element that describes this Object. More...

template<class T >
PropertyIndex	addProperty (const std::string &name, const std::string &comment, const T &value)
	Define a new single-value property of known type T, with the given name, associated comment, and initial value. More...

template<class T >
PropertyIndex	addOptionalProperty (const std::string &name, const std::string &comment)
	Add an optional property, meaning it can contain either no value or a single value. More...

template<class T >
PropertyIndex	addOptionalProperty (const std::string &name, const std::string &comment, const T &value)
	Add an optional property, meaning it can contain either no value or a single value. More...

template<class T >
PropertyIndex	addListProperty (const std::string &name, const std::string &comment, int minSize, int maxSize)
	Define a new list-valued property of known type T, with the given name, associated comment, minimum (==0) and maximum (>0) allowable list lengths, and a zero-length initial value. More...

template<class T , template< class > class Container>
PropertyIndex	addListProperty (const std::string &name, const std::string &comment, int minSize, int maxSize, const Container< T > &valueList)
	Define a new list-valued property as above, but assigning an initial value via some templatized container class that supports size() and indexing. More...

PropertyIndex	getPropertyIndex (const std::string &name) const
	Look up a property by name and return its PropertyIndex if it is found. More...

template<class T >
PropertyIndex	getPropertyIndex () const
	Look up an unnamed property by the type of object it contains, and return its PropertyIndex if it is found. More...

void	updateFromXMLDocument ()
	Use this method only if you're deserializing from a file and the object is at the top level; that is, primarily in constructors that take a file name as input. More...

void	setDocument (XMLDocument *doc)
	Unconditionally set the XMLDocument associated with this object. More...

const XMLDocument *	getDocument () const
	Get a const pointer to the document (if any) associated with this object. More...

XMLDocument *	updDocument ()
	Get a writable pointer to the document (if any) associated with this object. More...

Related Functions inherited from OpenSim::Object
#define	OpenSim_DECLARE_CONCRETE_OBJECT(ConcreteClass, SuperClass)
	Macro to be included as the first line of the class declaration for any non-templatized, concrete class that derives from OpenSim::Object. More...

#define	OpenSim_DECLARE_ABSTRACT_OBJECT(ConcreteClass, SuperClass)
	Macro to be included as the first line of the class declaration for any still-abstract class that derives from OpenSim::Object. More...

#define	OpenSim_DECLARE_CONCRETE_OBJECT_T(ConcreteClass, TArg, SuperClass)
	Macro to be included as the first line of the class declaration for any templatized, concrete class that derives from OpenSim::Object, like Set<T>. More...

#define	OpenSim_DECLARE_ABSTRACT_OBJECT_T(ConcreteClass, TArg, SuperClass)
	Macro to be included as the first line of the class declaration for any templatized, still-abstract class that derives from OpenSim::Object. More...

Constructor & Destructor Documentation

OpenSim::Storage::Storage	(	int	aCapacity = `Storage_DEFAULT_CAPACITY`,
		const std::string &	aName = `"UNKNOWN"`
	)

explicit

OpenSim::Storage::Storage	(	const std::string &	aFileName,
		bool	readHeadersOnly = `false`
	)

OpenSim::Storage::Storage	(	const Storage &	aStorage,
		bool	aCopyData = `true`
	)

OpenSim::Storage::Storage	(	const Storage &	aStorage,
		int	aStateIndex,
		int	aN,
		const char *	aDelimiter = `"\t"`
	)

virtual OpenSim::Storage::~Storage ( )

virtual

Member Function Documentation

void OpenSim::Storage::add ( double aValue)

void OpenSim::Storage::add	(	int	aN,
		double	aY[]
	)

void OpenSim::Storage::add	(	int	aN,
		double	aValue
	)

void OpenSim::Storage::add ( StateVector * aStateVector)

void OpenSim::Storage::add ( Storage * aStorage)

void OpenSim::Storage::addKeyValuePair	(	const std::string &	aKey,
		const std::string &	aValue
	)

void OpenSim::Storage::addToRdStorage	(	Storage &	rStorage,
		double	aStartTime,
		double	aEndTime
	)

virtual int OpenSim::Storage::append	(	const StateVector &	aVec,
		bool	aCheckForDuplicateTime = `true`
	)

virtual

Implements OpenSim::StorageInterface.

virtual int OpenSim::Storage::append ( const Array< StateVector > & aArray)

virtual

Implements OpenSim::StorageInterface.

virtual int OpenSim::Storage::append	(	double	aT,
		int	aN,
		const double *	aY,
		bool	aCheckForDuplicateTime = `true`
	)

virtual

Implements OpenSim::StorageInterface.

virtual int OpenSim::Storage::append	(	double	aT,
		const SimTK::Vector &	aY,
		bool	aCheckForDuplicateTime = `true`
	)

virtual

Implements OpenSim::StorageInterface.

virtual int OpenSim::Storage::append	(	double	aT,
		const Array< double > &	aY,
		bool	aCheckForDuplicateTime = `true`
	)

virtual

virtual int OpenSim::Storage::append	(	double	aT,
		const SimTK::Vec3 &	aY,
		bool	aCheckForDuplicateTime = `true`
	)

inlinevirtual

Reimplemented from OpenSim::StorageInterface.

double OpenSim::Storage::compareColumn	(	Storage &	aOtherStorage,
		const std::string &	aColumnName,
		double	startTime,
		double	endTime = `-1.0`
	)

double OpenSim::Storage::compareColumnRMS	(	Storage &	aOtherStorage,
		const std::string &	aColumnName,
		double	startTime = `SimTK::NaN`,
		double	endTime = `SimTK::NaN`
	)

void OpenSim::Storage::compareWithStandard	(	Storage &	standard,
		Array< std::string > &	columnsUsed,
		Array< double > &	comparisons
	)

int OpenSim::Storage::computeArea	(	int	aN,
		double *	aArea
	)		const

int OpenSim::Storage::computeArea	(	double	aTI,
		double	aTF,
		int	aN,
		double *	aArea
	)		const

int OpenSim::Storage::computeAverage	(	int	aN,
		double *	aAve
	)		const

int OpenSim::Storage::computeAverage	(	double	aTI,
		double	aTF,
		int	aN,
		double *	aAve
	)		const

void OpenSim::Storage::crop	(	const double	newStartTime,
		const double	newFinalTime
	)

void OpenSim::Storage::divide ( double aValue)

void OpenSim::Storage::divide	(	int	aN,
		double	aY[]
	)

void OpenSim::Storage::divide ( StateVector * aStateVector)

void OpenSim::Storage::divide ( Storage * aStorage)

void OpenSim::Storage::findFrameRange	(	double	aStartTime,
		double	aEndTime,
		int &	oStartFrame,
		int &	oEndFrame
	)		const

virtual int OpenSim::Storage::findIndex ( double aT) const

virtual

Implements OpenSim::StorageInterface.

virtual int OpenSim::Storage::findIndex	(	int	aI,
		double	aT
	)		const

virtual

Implements OpenSim::StorageInterface.

int OpenSim::Storage::getCapacityIncrement ( ) const

OpenSim::Array<int> OpenSim::Storage::getColumnIndicesForIdentifier ( const std::string & identifier) const

Get indices of columns corresponding to identifier, empty array if identifier is not found in labels.

const Array<std::string>& OpenSim::Storage::getColumnLabels ( ) const

int OpenSim::Storage::getData	(	int	aTimeIndex,
		int	aStateIndex,
		double &	rValue
	)		const

int OpenSim::Storage::getData	(	int	aTimeIndex,
		int	aStateIndex,
		int	aN,
		double **	rData
	)		const

int OpenSim::Storage::getData	(	int	aTimeIndex,
		int	aStateIndex,
		int	aN,
		double *	rData
	)		const

int OpenSim::Storage::getData	(	int	aTimeIndex,
		int	aN,
		double **	rData
	)		const

int OpenSim::Storage::getData	(	int	aTimeIndex,
		int	aN,
		double *	rData
	)		const

int OpenSim::Storage::getData	(	int	aTimeIndex,
		int	aN,
		Array< double > &	rData
	)		const

int OpenSim::Storage::getData	(	int	aTimeIndex,
		int	aN,
		SimTK::Vector &	v
	)		const

int OpenSim::Storage::getDataAtTime	(	double	aTime,
		int	aN,
		double **	rData
	)		const

int OpenSim::Storage::getDataAtTime	(	double	aTime,
		int	aN,
		double *	rData
	)		const

int OpenSim::Storage::getDataAtTime	(	double	aTime,
		int	aN,
		Array< double > &	rData
	)		const

virtual

Implements OpenSim::StorageInterface.

int OpenSim::Storage::getDataAtTime	(	double	aTime,
		int	aN,
		SimTK::Vector &	v
	)		const

int OpenSim::Storage::getDataColumn	(	int	aStateIndex,
		double *&	rData
	)		const

int OpenSim::Storage::getDataColumn	(	int	aStateIndex,
		Array< double > &	rData
	)		const

int OpenSim::Storage::getDataColumn	(	const std::string &	columnName,
		double *&	rData
	)		const

void OpenSim::Storage::getDataColumn	(	const std::string &	columnName,
		Array< double > &	data,
		double	startTime = `0.0`
	)

virtual

Implements OpenSim::StorageInterface.

void OpenSim::Storage::getDataForIdentifier	(	const std::string &	identifier,
		Array< Array< double > > &	rData,
		double	startTime = `0.0`
	)		const

A data block, like a vector for a force, point, etc...

will span multiple "columns" It is desirable to access the block as a single entity provided an identifier that is common to all components (such as prefix in the column label).

Parameters

identifier	string identifying a single block of data
rData	Array<Array<double>> of data belonging to the identifier
startTime	at what time to begin (if not 0)

const std::string& OpenSim::Storage::getDescription ( ) const

inline

const int& OpenSim::Storage::getFileVersion ( ) const

inline

virtual double OpenSim::Storage::getFirstTime ( ) const

virtual

Implements OpenSim::StorageInterface.

const std::string& OpenSim::Storage::getHeaderToken ( ) const

virtual StateVector* OpenSim::Storage::getLastStateVector ( ) const

virtual

Implements OpenSim::StorageInterface.

virtual double OpenSim::Storage::getLastTime ( ) const

virtual

Implements OpenSim::StorageInterface.

static const int& OpenSim::Storage::getLatestVersion ( )

inlinestatic

double OpenSim::Storage::getMinTimeStep ( ) const

const std::string& OpenSim::Storage::getName ( ) const

inline

virtual int OpenSim::Storage::getSize ( ) const

inlinevirtual

Implements OpenSim::StorageInterface.

int OpenSim::Storage::getSmallestNumberOfStates ( ) const

const int OpenSim::Storage::getStateIndex	(	const std::string &	aColumnName,
		int	startIndex = `0`
	)		const

virtual StateVector* OpenSim::Storage::getStateVector ( int aTimeIndex) const

virtual

Implements OpenSim::StorageInterface.

int OpenSim::Storage::getStepInterval ( ) const

bool OpenSim::Storage::getTime	(	int	aTimeIndex,
		double &	rTime,
		int	aStateIndex = `-1`
	)		const

virtual int OpenSim::Storage::getTimeColumn	(	double *&	rTimes,
		int	aStateIndex = `-1`
	)		const

virtual

virtual int OpenSim::Storage::getTimeColumn	(	Array< double > &	rTimes,
		int	aStateIndex = `-1`
	)		const

virtual

Implements OpenSim::StorageInterface.

virtual void OpenSim::Storage::getTimeColumnWithStartTime	(	Array< double > &	rTimes,
		double	startTime = `0.0`
	)		const

virtual

Implements OpenSim::StorageInterface.

void OpenSim::Storage::getValueForKey	(	const std::string &	aKey,
		std::string &	rValue
	)		const

bool OpenSim::Storage::getWriteSIMMHeader ( ) const

bool OpenSim::Storage::hasKey ( const std::string & aKey) const

Storage* OpenSim::Storage::integrate	(	int	aI1 = `-2`,
		int	aI2 = `-1`
	)		const

Storage* OpenSim::Storage::integrate	(	double	aT1,
		double	aT2
	)		const

void OpenSim::Storage::interpolateAt ( const Array< double > & targetTimes)

const bool OpenSim::Storage::isInDegrees ( ) const

inline

void OpenSim::Storage::lowpassFIR	(	int	aOrder,
		double	aCutoffFequency
	)

void OpenSim::Storage::lowpassIIR ( double aCutoffFequency)

bool OpenSim::Storage::makeStorageLabelsUnique ( )

void OpenSim::Storage::multiply ( double aValue)

void OpenSim::Storage::multiply	(	int	aN,
		double	aY[]
	)

void OpenSim::Storage::multiply ( StateVector * aStateVector)

void OpenSim::Storage::multiply ( Storage * aStorage)

void OpenSim::Storage::multiplyColumn	(	int	aIndex,
		double	aValue
	)

Storage& OpenSim::Storage::operator= ( const Storage & aStorage)

Assignment operator to copy contents of an existing storage.

void OpenSim::Storage::pad ( int aPadSize)

bool OpenSim::Storage::print	(	const std::string &	aFileName,
		const std::string &	aMode = `"w"`,
		const std::string &	aComment = `""`
	)		const

int OpenSim::Storage::print	(	const std::string &	aFileName,
		double	aDT,
		const std::string &	aMode = `"w"`
	)		const

static void OpenSim::Storage::printResult	(	const Storage *	aStorage,
		const std::string &	aName,
		const std::string &	aDir,
		double	aDT,
		const std::string &	aExtension
	)

static

void OpenSim::Storage::purge ( )

inline

double OpenSim::Storage::resample	(	double	aDT,
		int	aDegree
	)

double OpenSim::Storage::resampleLinear ( double aDT)

int OpenSim::Storage::reset ( int aIndex = 0)

int OpenSim::Storage::reset ( double aTime)

void OpenSim::Storage::scaleTime ( double aValue)

void OpenSim::Storage::setCapacityIncrement ( int aIncrement)

void OpenSim::Storage::setColumnLabels ( const Array< std::string > & aColumnLabels)

void OpenSim::Storage::setDataColumn	(	int	aStateIndex,
		const Array< double > &	aData
	)

void OpenSim::Storage::setDataColumnToFixedValue	(	const std::string &	columnName,
		double	newValue
	)

void OpenSim::Storage::setDescription ( const std::string & aDescription)

inline

void OpenSim::Storage::setHeaderToken ( const std::string & aToken)

void OpenSim::Storage::setInDegrees ( const bool isInDegrees)

inline

void OpenSim::Storage::setName ( const std::string & aName)

inline

void OpenSim::Storage::setOutputFileName ( const std::string & aFileName)

virtual

Implements OpenSim::StorageInterface.

void OpenSim::Storage::setStepInterval ( int aStepInterval)

void OpenSim::Storage::setWriteSIMMHeader ( bool aTrueFalse)

void OpenSim::Storage::shiftTime ( double aValue)

void OpenSim::Storage::smoothSpline	(	int	aOrder,
		double	aCutoffFrequency
	)

virtual int OpenSim::Storage::store	(	int	aStep,
		double	aT,
		int	aN,
		const double *	aY
	)

virtual

Implements OpenSim::StorageInterface.

void OpenSim::Storage::subtract ( double aValue)

void OpenSim::Storage::subtract	(	int	aN,
		double	aY[]
	)

void OpenSim::Storage::subtract ( StateVector * aStateVector)

void OpenSim::Storage::subtract ( Storage * aStorage)

Member Data Documentation

Array<std::string> OpenSim::Storage::_columnLabels

protected

Column labels.

std::string OpenSim::Storage::_description

protected

std::string OpenSim::Storage::_fileName

protected

Cache for fileName and file pointer when the file is opened so we can flush and write intermediate files if needed.

int OpenSim::Storage::_fileVersion

protected

Storage file version as written to the file.

FILE* OpenSim::Storage::_fp

protected

std::string OpenSim::Storage::_headerToken

protected

Token used to mark the end of the description in a file.

bool OpenSim::Storage::_inDegrees

protected

Are angles, if any, specified in radians or degrees?

MapKeysToValues OpenSim::Storage::_keyValueMap

protected

Map between keys in file header and values.

int OpenSim::Storage::_lastI

mutableprotected

Last index at which a search was started.

std::string OpenSim::Storage::_name

protected

Name and Description.

int OpenSim::Storage::_stepInterval

protected

Step interval at which states in a simulation are stored.

See store().

Array<StateVector> OpenSim::Storage::_storage

protected

Array of StateVectors.

Units OpenSim::Storage::_units

protected

Units in which the data is represented.

bool OpenSim::Storage::_writeSIMMHeader

protected

Flag for whether or not to insert a SIMM style header.

const char* OpenSim::Storage::DEFAULT_HEADER_SEPARATOR

static

const char* OpenSim::Storage::DEFAULT_HEADER_TOKEN

static

Default token used to mark the end of the storage description in a file.

const int OpenSim::Storage::LatestVersion

staticprotected

const int OpenSim::Storage::MAX_RESAMPLE_SIZE

static

std::string OpenSim::Storage::simmReservedKeys[]

staticprotected

The documentation for this class was generated from the following file:

/home/fitze/repos/opensim/Branches/OpenSim32ForDoxygen/OpenSim/Common/Storage.h

Public Member Functions

Static Public Member Functions

Static Public Attributes

Protected Attributes

Static Protected Attributes

Additional Inherited Members

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation