OpenCap

OpenCap is a software package to estimate 3D human
movement dynamics from smartphone videos.
Forum posts last week: 1
New followers: 1

Platform for Dynamic Simulation and Control of Movement based on OpenSim&MATLAB

This project overcomes neuromusculoskeletal
systems limitations of MATLAB®/Simulink® and
robust design & control limitations of OpenSim
through an interface between these two software
packages that combines relevant strengths of each
individual package.
Total followers: 73

OpenArm: Volumetric & Time Series Models of Muscle Deformation

The OpenArm data sets are designed to enable study
of force- and kinematic-induced muscle deformation
for applications in biomechanics research,
computer graphics, and assistive device
development. **NEW:** The OpenArm Multisensor
2.0 data set contains new time series of
ultrasound-measured brachioradialis deformation,
surface electromyography (sEMG)-measured
activation, force, and goal trajectory data, for
various force-, deformation-, and activation-based
trajectory tracking tasks, under refined
conditions from those of the 1.0 data set. Also
included are all analysis, real-time muscle
deformation tracking, and display code. The
OpenArm Multisensor 1.0 data set contains time
series cross-sectional ultrasound scans of the
brachioradialis muscle under variable elbow
loading, alongside corresponding surface
electromyography (sEMG), acoustic myography (AMG),
and force data. The OpenArm 1.0 and 2.0 data
sets encompass factorial sets of volumetric scans
of the arm, generated using ultrasound and motion
capture, that allow for analysis of both force-
and configuration-associated muscle deformation.
Downloads last week: 81
Total downloads: 15,752

Open Knee(s): Virtual Biomechanical Representations of the Knee Joint

Open Knee(s) goals have been to provide free
access to three-dimensional finite element
representations of the knee joint and promote open
development of knee models for collaborative
testing and use. <B>Definitive Guide to
Project and Its Outcomes</B> Open Knee(s): A
Free and Open Source Library of Specimen-Specific
Models and Related Digital Assets for Finite
Element Analysis of the Knee Joint. Chokhandre S,
Schwartz A, Klonowski E, Landis B, Erdemir A. Ann
Biomed Eng. 2023 Jan;51(1):10-23. (<A
HREF="https://doi.org/10.1007/s10439-022-0307
4-0">https://doi.org/10.1007/s10439-022-03
074-0</A>) <B>Definitive Guide to
Open Knee(s) Data</B> Specimen specific
imaging and joint mechanical testing data for next
generation virtual knees. Chokhandre S, Neumann
EE, Nagle TF, Colbrunn RW, Flask CA, Colak C,
Halloran J, Erdemir A. Data Brief. 2021 Jan
30;35:106824. (<A
HREF="https://doi.org/10.1016/j.dib.2021.1068
24">https://doi.org/10.1016/j.dib.2021.106
824</A>) <B>Database of Open
Knee(s) Models</B> Under Downloads ->
Data Share -> View -> OKS_models and at
(<A
HREF="https://doi.org/10.18735/b0zv-n395"
;>https://doi.org/10.18735/b0zv-n395</A>)
<B>Database of Open Knee(s)
Data</B> Growing version under Downloads
-> Data Share -> View -> Open Knees Data;
permanent static version at (<A
HREF="https://doi.org/10.18735/4e78-1311"
;>https://doi.org/10.18735/4e78-1311</A>)
Downloads last week: 207
Total followers: 47
Total downloads: 147,221

Model of the Scapulothoracic Joint

Provide an OpenSim Joint model that enables a more
accurate representation of scapula mechanics in
musculoskeletal simulations.
Total followers: 30
Total downloads: 10,665

Full Body Model for use in Dynamic Simulations of Human Gait

Full body musculoskeletal model with
muscle-actuated lower extremity and
torque-actuated torso/upper extremity for use in
dynamic simulations of human movement.
Total followers: 35
Total downloads: 13,621

OpenMM Zephyr

OpenMM Zephyr provides a visual application for
running GPU-accelerated molecular simulations.
Downloads last week: 29,354
Total downloads: 1,180,308

Thoracolumbar spine and rib cage model in OpenSim

The aim of this project is to provide detailed and
well-validated musculoskeletal models of the
thoracolumbar spine and rib cage, particularly for
investigators with an interest studying
musculoskeletal loading in the trunk.
Total followers: 39

Snorkel

Snorkel is an open-source system that generates
training data for information extraction systems,
also known as predictive systems.
Downloads last week: 111
Total downloads: 46,799

OpenMM

OpenMM includes everything one needs to run modern
molecular simulations. It is extremely flexible
with its custom functions, is open-source, and has
high performance, especially on recent GPUs.
Downloads last week: 1,581
Total followers: 66
Total downloads: 834,475

Closed loop simulation of a human-exoskeleton and kinetic and kinematic modeling

This project attempts to tackle some of the
challenges in developing an exoskeleton device
using simulation methods. in this project, the
closed loop simulation of a human exoskeleton is
performed .In this study, a simulation-based
method is presented for the designing and analysis
of the parameters of an exoskeleton and its
wearer’s kinetics and kinematics. Model-based
design software, including OpenSim and Inventor,
and mathematical software, such as MATLAB, are
integrated. This method can assist in the
modification of exoskeleton devices and allow
physiologists, and physical therapists to
generate new solutions for rehabilitation programs
using exoskeletons.
Downloads last week: 73
Total downloads: 10,408

Calibrated EMG-Informed Neuromusculoskeletal Modelling Toolbox (CEINMS)

Provides an easy to use toolbox, compatible with
OpenSim, for the estimation of the human lower
extremity muscle and joint dynamics.
Total followers: 41

Whole-Cell Computational Model of Mycoplasma genitalium

This project provides all code and data for the
first "whole-cell" model of the entire life cycle
of a living organism, Mycoplasma
genitalium.
Downloads last week: 2,048
Total downloads: 287,670

Upper Extremity Dynamic Model

Provides the files associated with a dynamic model
of the upper limb for use in SIMM or OpenSim.
Total followers: 45

OpenSim

Provide easy-to-use, extensible software for
modeling, simulating, controlling, and analyzing
the neuromusculoskeletal system.
Downloads last week: 1,426
Forum posts last week: 10
Total followers: 318
Total downloads: 812,453