Here is a list of all class members with links to the classes they belong to:

- c -

• c() : IpoptNLP , OrigIpoptNLP , RestoIpoptNLP
• c_evals() : IpoptNLP , OrigIpoptNLP , RestoIpoptNLP
• C_STYLE : TNLP
• CachedResults() : CachedResults
• CacheEntry() : CacheEntry
• cacheToString() : State
• Cadmium() : Element::Cadmium
• Caesium : Element
• calc() : Cubic , SinOmegaX
• calcAcceleration() : SimbodyMatterSubsystem
• calcAccelerationConstraintMatrixA() : Constraint
• calcAccelerationConstraintMatrixAt() : Constraint
• calcAccelerationErrorFromUDot() : Constraint
• calcAccelerationIgnoringConstraints() : SimbodyMatterSubsystem
• calcAccelerationsFromSubtreeUDot() : SimbodyMatterSubtree
• calcAccelerationsFromZeroUDot() : SimbodyMatterSubtree
• calcArcLength() : AnalyticCurve
• calcArea() : AnalyticSurface
• calcAtomAccelerationInGroundFrame() : Compound
• calcAtomLocationInCompoundFrame() : Compound
• calcAtomLocationInGroundFrame() : Compound
• calcAtomVelocityInGroundFrame() : Compound
• calcBodyCentralInertia() : MobilizedBody
• calcBodyInertiaAboutAnotherBodyStation() : MobilizedBody
• calcBodyMomentumAboutBodyMassCenterInGround() : MobilizedBody
• calcBodyMomentumAboutBodyOriginInGround() : MobilizedBody
• calcBodyMovingPointAccelerationInBody() : MobilizedBody
• calcBodyMovingPointVelocityInBody() : MobilizedBody
• calcBodySpatialInertiaMatrixInGround() : MobilizedBody
• calcCentralInertia() : MassProperties
• CalcCentralityMeasure() : IpoptCalculatedQuantities
• calcClusterMassProperties() : DuMMForceFieldSubsystem
• calcConstraintForcesFromMultipliers() : Constraint
• calcD1() : SinOmegaX , Cubic
• calcD2() : SinOmegaX , Cubic
• calcDecorativeGeometryAndAppend() : Subsystem::Guts , System::Guts , Constraint::Custom::Implementation , MobilizedBody::Custom::Implementation
• calcDecorativeGeometryAndAppendImpl() : Subsystem::Guts
• calcDefaultAtomFrameInCompoundFrame() : Compound
• calcDefaultAtomLocationInCompoundFrame() : Compound
• calcDefaultAtomLocationInGroundFrame() : Compound
• calcDefaultDihedralAngle() : Compound
• calcDefaultTorsionAngle() : Ethane
• calcDerivative() : Differentiator , Function , Function::Constant , Function::Linear , Function::Polynomial , Spline , SinusoidFunction
• calcDihedralAngle() : Compound
• calcEnergy() : MultibodySystem
• calcEventTriggerInfo() : Subsystem::Guts , System::Guts
• calcEventTriggerInfoImpl() : System::Guts
• calcForce() : Force::Custom::Implementation
• calcGradient() : Differentiator
• calcInternalGradientFromSpatial() : SimbodyMatterSubsystem
• Calcium() : Element::Calcium
• CalciumIon() : CalciumIon
• calcJacobian() : Differentiator
• calcKineticEnergy() : MultibodySystem , SimbodyMatterSubsystem
• calcMInverseV() : SimbodyMatterSubsystem
• calcMobilizerReactionForces() : SimbodyMatterSubsystem
• calcMobilizerTransformFromQ() : MobilizedBody::Custom::Implementation
• calcMovingPointToPointDistance2ndTimeDerivative() : MobilizedBody
• calcMovingPointToPointDistanceTimeDerivative() : MobilizedBody
• calcNormalFromSurfaceParameters() : AnalyticSurface
• CalcNormOfType() : IpoptCalculatedQuantities
• calcPositionConstraintMatrixP() : Constraint
• calcPositionConstraintMatrixPQInverse() : Constraint
• calcPositionConstraintMatrixPt() : Constraint
• calcPositionErrorFromQ() : Constraint
• calcPositionFromArcLengthParameter() : AnalyticCurve
• calcPositionFromSurfaceParameters() : AnalyticSurface
• calcPositionsFromSubtreeQ() : SimbodyMatterSubtree
• calcPotentialEnergy() : Force::Custom::Implementation , ForceSubsystem::Guts , MultibodySystem
• calcQBlockForBodyXYZInBodyFrame() : Rotation
• calcQDot() : SimbodyMatterSubsystem
• calcQDotDot() : SimbodyMatterSubsystem
• calcQErrUnitTolerances() : Subsystem::Guts
• calcQErrUnitTolerancesImpl() : Subsystem::Guts
• calcQInvBlockForBodyXYZInBodyFrame() : Rotation
• calcQUnitWeights() : Subsystem::Guts
• calcQUnitWeightsImpl() : Subsystem::Guts
• calcShiftedInertia() : MassProperties
• calcShiftedMassProps() : MassProperties
• calcSpatialKinematicsFromInternal() : SimbodyMatterSubsystem
• calcStationToStationDistance() : MobilizedBody
• calcStationToStationDistance2ndTimeDerivative() : MobilizedBody
• calcStationToStationDistanceTimeDerivative() : MobilizedBody
• calcSystemCentralInertiaInGround() : SimbodyMatterSubsystem
• calcSystemMass() : SimbodyMatterSubsystem
• calcSystemMassCenterAccelerationInGround() : SimbodyMatterSubsystem
• calcSystemMassCenterLocationInGround() : SimbodyMatterSubsystem
• calcSystemMassCenterVelocityInGround() : SimbodyMatterSubsystem
• calcSystemMassPropertiesInGround() : SimbodyMatterSubsystem
• calcSystemMomentumAboutGroundOrigin() : SimbodyMatterSubsystem
• calcTimeOfNextScheduledEvent() : Subsystem::Guts , System::Guts
• calcTimeOfNextScheduledEventImpl() : System::Guts
• calcTimeOfNextScheduledReport() : Subsystem::Guts , System::Guts
• calcTimeOfNextScheduledReportImpl() : System::Guts
• calcTimescale() : System::Guts
• calcTimescaleImpl() : System::Guts
• calcTransformedInertia() : MassProperties
• calcTransformedMassProps() : MassProperties
• calcTransitionMask() : System::EventTriggerInfo
• calcTransitionToReport() : System::EventTriggerInfo
• calcTreeEquivalentMobilityForces() : SimbodyMatterSubsystem
• calcUErrUnitTolerances() : Subsystem::Guts
• calcUErrUnitTolerancesImpl() : Subsystem::Guts
• CalculateAlphaMin() : BacktrackingLSAcceptor , FilterLSAcceptor
• CalculateMu() : LoqoMuOracle , MuOracle , ProbingMuOracle , QualityFunctionMuOracle
• CalculateMultipliers() : EqMultiplierCalculator , LeastSquareMultipliers
• calcUnnormalizedQBlockForQuaternion() : Rotation
• calcUnnormalizedQInvBlockForQuaternion() : Rotation
• calcUUnitWeights() : Subsystem::Guts
• calcUUnitWeightsImpl() : Subsystem::Guts
• calcValue() : Function , Function::Constant , Function::Linear , Function::Polynomial , Spline , SinusoidFunction
• calcVelocitiesFromSubtreeU() : SimbodyMatterSubtree
• calcVelocitiesFromZeroU() : SimbodyMatterSubtree
• calcVelocityConstraintMatrixV() : Constraint
• calcVelocityConstraintMatrixVt() : Constraint
• calcVelocityErrorFromU() : Constraint
• calcVolume() : AnalyticVolume
• calcYErrUnitTolerances() : System::Guts
• calcYErrUnitTolerancesImpl() : System::Guts
• calcYUnitWeights() : System::Guts
• calcYUnitWeightsImpl() : System::Guts
• calcZUnitWeights() : Subsystem::Guts
• calcZUnitWeightsImpl() : Subsystem::Guts
• Californium() : Element::Californium
• canonicalizeAtomName() : PdbAtom
• Cant() : Cant
• capacity() : ArrayHelper , ArrayBase
• Carbon() : Element::Carbon
• CarboxylateGroup() : CarboxylateGroup
• Cartesian : MobilizedBody
• castAwayNegatorIfAny() : CNT , NTraits< complex< R > > , NTraits< conjugate< R > > , Mat , Row , SymMat , Vec
• CEN_CUBED_RECIPROCAL : QualityFunctionMuOracle
• CEN_LOG : QualityFunctionMuOracle
• CEN_NONE : QualityFunctionMuOracle
• CEN_RECIPROCAL : QualityFunctionMuOracle
• CentralDifference : Differentiator
• CentralityEnum : QualityFunctionMuOracle
• Cerium() : Element::Cerium
• Cesium() : Element::Cesium
• CesiumIon() : CesiumIon
• cext : UserData
• CheckAcceptabilityOfTrialPoint() : BacktrackingLSAcceptor , FilterLSAcceptor
• CheckConvergence() : ConvergenceCheck , OptimalityErrorConvergenceCheck , RestoFilterConvergenceCheck , TimingStatistics
• CheckDerivatives() : TNLPAdapter
• checkForConnection() : VmdConnection
• CheckSkippedLineSearch() : BacktrackingLineSearch , LineSearch
• child1 : OBBTreeNodeImpl
• child2 : OBBTreeNodeImpl
• ChlorideIon() : ChlorideIon
• Chlorine() : Element::Chlorine
• CholeskyBackSolveMatrix() : DenseGenMatrix
• CholeskySolveMatrix() : DenseGenMatrix
• CholeskySolveVector() : DenseGenMatrix
• Chromium() : Element::Chromium
• classifyTransition() : EventStatus
• Clear() : Filter
• clear() : MatrixBase , VectorBase , RowVectorBase , MatrixHelper , ArrayHelper , ArrayBase , Concretize , EnumerationSet , EnumerationSet::EnumerationSetRep , StableArray , State , SimbodyMatterSubtree , SimbodyMatterSubtreeResults
• clearEventTrigger() : EventStatus
• clearHandle() : PIMPLHandle
• clearMyHandle() : ContactGeometryImpl
• clientIsConnected() : VmdConnection
• clone() : TmpMatrixView_ , TmpVectorViewT , TmpRowVectorView_ , AbstractValue , ValueHelper , Study::Guts , Subsystem::Guts , System::Guts , Constraint::Custom::Implementation , ContactGeometryImpl , ContactGeometry::HalfSpaceImpl , ContactGeometry::SphereImpl , ContactGeometry::TriangleMeshImpl , MobilizedBody::Custom::Implementation , MechanicalDAEIntegrator , OLDCPodesIntegrator , OLDExplicitEuler , OLDRungeKuttaMerson , Clonable
• cloneForNewParent() : MobilizedBody
• cloneImpl() : Study::Guts , Subsystem::Guts , System::Guts
• closeClientConnection() : VmdConnection
• Cobalt() : Element::Cobalt
• coeff : UserData
• coeffx : UserData
• coeffxy : UserData
• coeffy : UserData
• CoincidentFrames : Constraint
• CoincidentPoints : Constraint
• col() : Rotation , InverseRotation , Mat , MatrixBase
• cols : _DlsMat
• colScale() : MatrixBase , RowVectorBase , MatrixBase
• colScaleInPlace() : MatrixBase , RowVectorBase
• ColSpacing : CNT , negator , NTraits< complex< R > > , NTraits< conjugate< R > > , Mat , Row , SymMat , Vec
• colSum() : MatrixHelper
• ColType : Rotation , InverseRotation
• ColumnScaling() : ScaledMatrix , ScaledMatrixSpace
• ColVectorSpace() : MultiVectorMatrix , MultiVectorMatrixSpace
• comm : UserData , ProblemData , _N_VectorContent_Parallel
• compatibleAssign() : AbstractValue , ValueHelper
• compl_inf_tol_ : OptimalityErrorConvergenceCheck
• compose() : Transform , InverseTransform
• Compound() : Compound
• CompoundMatrix() : CompoundMatrix
• CompoundMatrixSpace() : CompoundMatrixSpace
• CompoundSymMatrix() : CompoundSymMatrix
• CompoundSymMatrixSpace() : CompoundSymMatrixSpace
• CompoundSystem : Compound , CompoundSystem
• CompoundVector() : CompoundVector
• CompoundVectorSpace() : CompoundVectorSpace
• CompressedPosIndices() : ExpansionMatrix , ExpansionMatrixSpace
• ComputeAcceptableTrialPoint() : TimingStatistics
• ComputeCholeskyFactor() : DenseGenMatrix
• ComputeEigenVectors() : DenseGenMatrix
• ComputeResiduals() : TimingStatistics
• ComputeSearchDirection() : TimingStatistics
• ComputeSymTScalingFactors() : TSymScalingMethod
• Concretize() : Concretize
• condition : MatrixCondition
• Condition : MatrixConditions
• conformingAdd() : Mat , Row , SymMat , Vec
• conformingDivide() : Mat
• conformingDivideFromLeft() : Mat
• conformingMultiply() : Mat , Row , Vec
• conformingMultiplyFromLeft() : Mat
• conformingSubtract() : SymMat , Mat , Row , Vec
• conformingSubtractFromLeft() : Mat
• conj() : conjugate< long double > , conjugate< float > , conjugate< double > , conjugate< long double >
• conjugate() : conjugate< float > , conjugate< double > , conjugate< long double > , conjugate< double >
• ConsiderNewSystem() : PDPerturbationHandler
• const_iterator : ArrayBase
• const_reference : ArrayBase
• Constant() : Function::Constant
• ConstantAngle() : Constraint::ConstantAngle
• ConstantDistance : Constraint
• ConstantForce() : Force::ConstantForce
• ConstantOrientation() : Constraint::ConstantOrientation
• ConstantSpeed() : Constraint::ConstantSpeed
• ConstantTorque() : Force::ConstantTorque
• ConstPtr : SmartPtr
• constr_viol_normtype() : IpoptCalculatedQuantities
• constr_viol_tol_ : OptimalityErrorConvergenceCheck
• constraint() : CPodesSystem , CPodesMultibodySystem
• Constraint() : Constraint
• Constraint::CustomImpl : Constraint::Custom::Implementation
• constraintFunc() : ProblemSystem , OptimizerSystem , ProblemSystem
• constraintJacobian() : ProblemSystem , OptimizerSystem
• ConstraintLinearity : CPodes
• Contact() : Contact , ContactImpl , Contact
• ContactGeometry() : ContactGeometry
• ContactGeometry::TriangleMesh : ContactGeometry::TriangleMeshImpl
• ContactGeometryImpl() : ContactGeometryImpl
• ContactImpl() : ContactImpl
• contains() : EnumerationSet , EnumerationSet::EnumerationSetRep
• containsAll() : EnumerationSet::EnumerationSetRep , EnumerationSet
• containsAny() : EnumerationSet , EnumerationSet::EnumerationSetRep
• containsPoint() : OrientedBoundingBox
• content : _generic_N_Vector
• CONTINUE : ConvergenceCheck
• Conventional : MatrixStorageFormats
• CONVERGED : ConvergenceCheck
• CONVERGED_TO_ACCEPTABLE_POINT : ConvergenceCheck
• ConvergedFailed() : ConvergedFailed
• ConvergenceCheck() : ConvergenceCheck
• ConvergenceStatus : ConvergenceCheck
• convertAngVelDotToBodyFixed123DotDot() : Rotation
• convertAngVelDotToBodyFixed321DotDot() : Rotation
• convertAngVelDotToQuaternionDotDot() : Rotation
• convertAngVelToBodyFixed123Dot() : Rotation
• convertAngVelToBodyFixed321Dot() : Rotation
• convertAngVelToQuaternionDot() : Rotation
• convertBodyFixed123DotToAngVel() : Rotation
• convertBodyFixed321DotToAngVel() : Rotation
• convertInboardBondCenterToOutboard() : Compound
• convertOneAxisRotationToOneAngle() : Rotation
• convertQuaternionDotToAngVel() : Rotation
• convertQuaternionToAngleAxis() : Quaternion
• convertRotationToAngleAxis() : Rotation
• convertRotationToBodyFixedXY() : Rotation
• convertRotationToBodyFixedXYZ() : Rotation
• convertRotationToQuaternion() : Rotation
• convertThreeAxesRotationToThreeAngles() : Rotation
• convertToEulerAngles() : SimbodyMatterSubsystem
• convertToQuaternions() : SimbodyMatterSubsystem
• convertTwoAxesRotationToTwoAngles() : Rotation
• ConvertValues() : TripletToCSRConverter , TripletToDenseConverter
• CoordinateAxis() : CoordinateAxis
• CoordinateCoupler() : Constraint::CoordinateCoupler
• Copper() : Element::Copper
• Copy() : Vector , DenseGenMatrix
• copyAccelerationsFromState() : SimbodyMatterSubtree
• copyAssign() : PIMPLHandle , MatrixBase , MatrixHelper
• CopyFromPos() : DenseVector
• CopyImpl() : Vector , CompoundVector , DenseVector
• copyInByRows() : MatrixHelper
• copyPositionsFromState() : SimbodyMatterSubtree
• CopyToPos() : DenseVector
• CopyTrialToCurrent() : IpoptData
• copyVelocitiesFromState() : SimbodyMatterSubtree
• Counter() : RegisteredOption
• cox : WebData , UserData
• coy : UserData , WebData
• cp : GenericScalarFunc
• CPodes() : CPodes
• CPodesIntegrator() : CPodesIntegrator
• CPodesMultibodySystem() : CPodesMultibodySystem
• CPodesRep : CPodes
• CppNScalarsPerElement : MatrixBase
• CpuTime() : TimedTask
• create() : RibonucleotideResidue , AminoAcidResidue , RibonucleotideResidue
• create_new_s() : IteratesVector
• create_new_s_copy() : IteratesVector
• create_new_v_L() : IteratesVector
• create_new_v_L_copy() : IteratesVector
• create_new_v_U() : IteratesVector
• create_new_v_U_copy() : IteratesVector
• create_new_x() : IteratesVector
• create_new_x_copy() : IteratesVector
• create_new_y_c() : IteratesVector
• create_new_y_c_copy() : IteratesVector
• create_new_y_d() : IteratesVector
• create_new_y_d_copy() : IteratesVector
• create_new_z_L() : IteratesVector
• create_new_z_L_copy() : IteratesVector
• create_new_z_U() : IteratesVector
• create_new_z_U_copy() : IteratesVector
• createAtomTargets() : Compound
• CreateBlockFromSpace() : CompoundMatrix
• createCluster() : DuMMForceFieldSubsystem
• createCompounds() : PDBReader
• createContactSet() : GeneralContactSubsystem
• createEventId() : DefaultSystemSubsystem
• createRestrictedState() : State
• createScheduledEvent() : Subsystem::Guts
• createState() : PDBReader
• createTriggeredEvent() : Subsystem::Guts
• crossProduct() : CoordinateAxis
• crossProductAxis() : CoordinateAxis
• crossProductSign() : CoordinateAxis
• CSR_Format_0_Offset : SparseSymLinearSolverInterface
• CSR_Format_1_Offset : SparseSymLinearSolverInterface
• Cubic() : Cubic
• Curium() : Element::Curium
• curr() : IpoptData
• curr_avrg_compl() : IpoptCalculatedQuantities
• curr_barrier_error() : IpoptCalculatedQuantities
• curr_barrier_obj() : IpoptCalculatedQuantities
• curr_c() : IpoptCalculatedQuantities
• curr_centrality_measure() : IpoptCalculatedQuantities
• curr_compl_s_L() : IpoptCalculatedQuantities
• curr_compl_s_U() : IpoptCalculatedQuantities
• curr_compl_x_L() : IpoptCalculatedQuantities
• curr_compl_x_U() : IpoptCalculatedQuantities
• curr_complementarity() : IpoptCalculatedQuantities
• curr_constraint_violation() : IpoptCalculatedQuantities
• curr_d() : IpoptCalculatedQuantities
• curr_d_minus_s() : IpoptCalculatedQuantities
• curr_dual_frac_to_the_bound() : IpoptCalculatedQuantities
• curr_dual_infeasibility() : IpoptCalculatedQuantities
• curr_exact_hessian() : IpoptCalculatedQuantities
• curr_f() : IpoptCalculatedQuantities
• curr_grad_barrier_obj_s() : IpoptCalculatedQuantities
• curr_grad_barrier_obj_x() : IpoptCalculatedQuantities
• curr_grad_f() : IpoptCalculatedQuantities
• curr_grad_lag_s() : IpoptCalculatedQuantities
• curr_grad_lag_with_damping_s() : IpoptCalculatedQuantities
• curr_grad_lag_with_damping_x() : IpoptCalculatedQuantities
• curr_grad_lag_x() : IpoptCalculatedQuantities
• curr_gradBarrTDelta() : IpoptCalculatedQuantities
• curr_jac_c() : IpoptCalculatedQuantities
• curr_jac_c_times_vec() : IpoptCalculatedQuantities
• curr_jac_cT_times_curr_y_c() : IpoptCalculatedQuantities
• curr_jac_cT_times_vec() : IpoptCalculatedQuantities
• curr_jac_d() : IpoptCalculatedQuantities
• curr_jac_d_times_vec() : IpoptCalculatedQuantities
• curr_jac_dT_times_curr_y_d() : IpoptCalculatedQuantities
• curr_jac_dT_times_vec() : IpoptCalculatedQuantities
• curr_mu() : IpoptData
• curr_nlp_constraint_violation() : IpoptCalculatedQuantities
• curr_nlp_error() : IpoptCalculatedQuantities
• curr_primal_dual_system_error() : IpoptCalculatedQuantities
• curr_primal_frac_to_the_bound() : IpoptCalculatedQuantities
• curr_primal_infeasibility() : IpoptCalculatedQuantities
• curr_relaxed_compl_s_L() : IpoptCalculatedQuantities
• curr_relaxed_compl_s_U() : IpoptCalculatedQuantities
• curr_relaxed_compl_x_L() : IpoptCalculatedQuantities
• curr_relaxed_compl_x_U() : IpoptCalculatedQuantities
• curr_sigma_s() : IpoptCalculatedQuantities
• curr_sigma_x() : IpoptCalculatedQuantities
• curr_slack_s_L() : IpoptCalculatedQuantities
• curr_slack_s_U() : IpoptCalculatedQuantities
• curr_slack_x_L() : IpoptCalculatedQuantities
• curr_slack_x_U() : IpoptCalculatedQuantities
• curr_tau() : IpoptData
• CurrentIsAcceptable() : ConvergenceCheck , OptimalityErrorConvergenceCheck
• CurrentPerturbation() : PDPerturbationHandler
• Custom() : MobilizedBody::Custom , Constraint::Custom , Force::Custom
• cvadj_mem : WebData
• cvode_mem : WebData
• cvode_memF : WebData
• Cylinder() : MobilizedBody::Cylinder
• cylinderAlongX() : Inertia
• cylinderAlongY() : Inertia
• cylinderAlongZ() : Inertia
• Cysteine() : AminoAcidResidue::Cysteine
• Cytidylate() : RibonucleotideResidue::Cytidylate
• CytosineBase() : CytosineBase